RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 OR1A1Q9P1Q5 309 aa12.27□□□□□ -0.45
MRPS28-204ENST00000519120 SCOCQ9UIL1 159 aa12.27□□□□□ -0.45
MRPS28-204ENST00000519120 V9GY05 133 aa12.27□□□□□ -0.45
MRPS28-204ENST00000519120 SPDEFO95238 335 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 DIRAS3O95661 229 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 GSTP1P09211 210 aaKnown RBP12.26□□□□□ -0.45
MRPS28-204ENST00000519120 SCTP09683 121 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
MRPS28-204ENST00000519120 SERPINB10P48595 397 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 VEGFCP49767 419 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 NDPQ00604 133 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 TMEM267Q0VDI3 215 aaPredicted RBP12.26□□□□□ -0.45
MRPS28-204ENST00000519120 C2orf76Q3KRA6 126 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 PYHIN1Q6K0P9 492 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 C11orf87Q6NUJ2 197 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 OR1N2Q8NGR9 330 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 CCDC90BQ9GZT6 254 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 TOLLIPQ9H0E2 274 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 FBXL15Q9H469 300 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 GNB4Q9HAV0 340 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 RNF150Q9ULK6 438 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 FOXA2Q9Y261 457 aaPredicted RBP12.26□□□□□ -0.45
MRPS28-204ENST00000519120 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
MRPS28-204ENST00000519120 NUBP2Q9Y5Y2 271 aa12.26□□□□□ -0.45
MRPS28-204ENST00000519120 TRDCB7Z8K6 153 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 H7C2Y5 167 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 DENRO43583 198 aaKnown RBP12.25□□□□□ -0.45
MRPS28-204ENST00000519120 PROP1O75360 226 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 PLGLAQ15195 96 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 AKIRIN2Q53H80 203 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 PLAC9Q5JTB6 97 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 ASPHD1Q5U4P2 390 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF367Q7RTV3 350 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 PDPNQ86YL7 162 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.25□□□□□ -0.45
MRPS28-204ENST00000519120 OR4A4PQ8NGN8 299 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 TSNAXQ99598 290 aaKnown RBP12.25□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF221Q9UK13 617 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 RAB22AQ9UL26 194 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 BLOC1S6Q9UL45 172 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 FBXO7Q9Y3I1 522 aa12.25□□□□□ -0.45
MRPS28-204ENST00000519120 TRAV1-2A0A0B4J238 106 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 A0A1W2PN81 502 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 PDCD5O14737 125 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 SOX15O60248 233 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 CHRNA7P36544 502 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 CLDN12P56749 244 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 GNB1P62873 340 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 PSG5Q15238 335 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF260Q3ZCT1 412 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 GLDNQ6ZMI3 551 aaPredicted RBP12.24□□□□□ -0.45
MRPS28-204ENST00000519120 GAB2Q9UQC2 676 aa12.24□□□□□ -0.45
MRPS28-204ENST00000519120 IGKV1-6A0A0C4DH72 117 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 FCN1O00602 326 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 APOA2P02652 100 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 TFAP2AP05549 437 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
MRPS28-204ENST00000519120 GALP22466 123 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 ECI1P42126 302 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 ECSCRQ19T08 205 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF429Q86V71 674 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 WWC2-AS2Q96NR7 200 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 CABLES2Q9BTV7 478 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 CENPOQ9BU64 300 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 SLA2Q9H6Q3 261 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.456e-9■■■■■ 33.2
MRPS28-204ENST00000519120 RDH8Q9NYR8 311 aa12.23□□□□□ -0.45
MRPS28-204ENST00000519120 METTL1Q9UBP6 276 aaKnown RBP12.23□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF256Q9Y2P7 627 aaPredicted RBP12.23□□□□□ -0.45
MRPS28-204ENST00000519120 TMEM272A0A1B0GTI8 110 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 OVOL1O14753 267 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 ARPC1BO15143 372 aaKnown RBP12.22□□□□□ -0.45
MRPS28-204ENST00000519120 FABP7O15540 132 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 LGALS1P09382 135 aaKnown RBP12.22□□□□□ -0.45
MRPS28-204ENST00000519120 CD3GP09693 182 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 RAB6AP20340 208 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 MAP2K4P45985 399 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 MRPS15P82914 257 aaKnown RBP12.22□□□□□ -0.45
MRPS28-204ENST00000519120 TAGLNQ01995 201 aaKnown RBP12.22□□□□□ -0.45
MRPS28-204ENST00000519120 SSX1Q16384 188 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 SRSF7Q16629 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
MRPS28-204ENST00000519120 IZUMO2Q6UXV1 221 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 PPP1R27Q86WC6 154 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 PRR25Q96S07 402 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 TPSG1Q9NRR2 321 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 NDUFB11Q9NX14 153 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 KCNK7Q9Y2U2 307 aa12.22□□□□□ -0.45
MRPS28-204ENST00000519120 DNAH9Q9NYC9 4486 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 TRDV1A0A1B0GX56 115 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 IFITM5A6NNB3 132 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 LINC01619G3V211 115 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 MFNGO00587 321 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 MRPS14O60783 128 aaKnown RBP12.21□□□□□ -0.45
MRPS28-204ENST00000519120 IGKV1-16P04430 117 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 FCGR3AP08637 254 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 GADD45AP24522 165 aa12.21□□□□□ -0.45
MRPS28-204ENST00000519120 MYL9P24844 172 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms