RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 LIPFP07098 398 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 PPIAL4GP0DN37 164 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 LYL1P12980 280 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 DUTP33316 252 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 NUP62P37198 522 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 LPAR6P43657 344 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 THBS3P49746 956 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 RAB32Q13637 225 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 ZNF345Q14585 488 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 ZNF585BQ52M93 769 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 NMSQ5H8A3 153 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 FAM71F2Q6NXP2 309 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 BTNL3Q6UXE8 466 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 SPAG16Q8N0X2 631 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 LYG1Q8N1E2 194 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 INO80EQ8NBZ0 244 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 LY6G5BQ8NDX9 201 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 ZNF596Q8TC21 504 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 TNFRSF14Q92956 283 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 RRNAD1Q96FB5 475 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 SSBP3Q9BWW4 388 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 MFFQ9GZY8 342 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 PLSCR3Q9NRY6 295 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 MBD2Q9UBB5 411 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 TNFSF18Q9UNG2 199 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 ZNF462Q96JM2 2506 aa12.37□□□□□ -0.43
TRAPPC9-205ENST00000518839 A0A1B0GU03 582 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 SLC31A2O15432 143 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 NDUFS7O75251 213 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 OR2F2O95006 317 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 IGHV1-8P0DP01 117 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 GNG10P50151 68 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 AKR1C2P52895 323 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 S100A10P60903 97 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 RPL30P62888 115 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 OR2F1Q13607 317 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 OR9G1Q8NH87 305 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 LEAP2Q969E1 77 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 BOLA1Q9Y3E2 137 aa12.36□□□□□ -0.43
TRAPPC9-205ENST00000518839 SAA2-SAA4A0A096LPE2 208 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 J3QKU1 62 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 NDUFS8O00217 210 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 IGHV4-39P01824 125 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 SAA2P0DJI9 122 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 CXCL2P19875 107 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 IL3RAP26951 378 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 S100A11P31949 105 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 ERVFRD-1P60508 538 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 ACOT7LQ6ZUV0 252 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 DCUN1D4Q92564 292 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 TMEM133Q9H2Q1 129 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 MMP24Q9Y5R2 645 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 POMT1Q9Y6A1 747 aa12.35□□□□□ -0.43
TRAPPC9-205ENST00000518839 USF3Q68DE3 2245 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 LOC105371242A0A075B767 164 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 LINC00473A8K010 186 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 J3QR06 171 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 M0R1W7 72 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 DEDDO75618 318 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 SCGB1D2O95969 90 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 HPRT1P00492 218 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 IGKV1-39P01597 117 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 IGKV1D-39P04432 117 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 PLA2G2AP14555 144 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 NKX2-1P43699 371 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 OPCMLQ14982 345 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 TMUB2Q71RG4 321 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 TMEM186Q96B77 213 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 RNF126Q9BV68 326 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 PLEKHA2Q9HB19 425 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 COA4Q9NYJ1 87 aa12.34□□□□□ -0.43
TRAPPC9-205ENST00000518839 MALRD1Q5VYJ5 2156 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 A0A1W2PPE3 182 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 A1L4Q6 167 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 E5RGE8 158 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 K7EPK0 472 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 TOR1AO14656 332 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 RGS13O14921 159 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 PROP1O75360 226 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 MBPP02686 304 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 PAX1P15863 534 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 PRRX1P54821 245 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 ZNF816Q0VGE8 651 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 NCR3LG1Q68D85 454 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 ZNF833PQ6ZTB9 187 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 ABHD12Q8N2K0 398 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 FAM71E2Q8N5Q1 922 aa12.33□□□□□ -0.44
TRAPPC9-205ENST00000518839 C11orf42Q8N5U0 333 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms