RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 LCE6AA0A183 80 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 TMEM272A0A1B0GTI8 110 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 OR5H14A6NHG9 310 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 TRDCB7Z8K6 153 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 RBBP9O75884 186 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 NDUFA3O95167 84 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 SMIM18P0DKX4 95 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 GALP22466 123 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 MYL9P24844 172 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 PSMB8P28062 276 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 HOXD3P31249 432 aaPredicted RBP8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 MRPS15P82914 257 aaKnown RBP8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 RPL39P5Q59GN2 51 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 CASC10Q5T4H9 136 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 TMEM65Q6PI78 240 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 FAM131AQ6UXB0 335 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 LCNL1Q6ZST4 164 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 OR8U1Q8NH10 309 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 ABHD14BQ96IU4 210 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 DUX3Q96PT4 197 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 RNF5Q99942 180 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 B9D2Q9BPU9 175 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 NDUFB11Q9NX14 153 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 ZMAT5Q9UDW3 170 aaKnown RBP8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 WSB1Q9Y6I7 421 aa8.26□□□□□ -1.09
PDGFRB-203ENST00000517660 TRAV41A0A0B4J266 112 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 SHISA3A0PJX4 238 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 IFITM5A6NNB3 132 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 G3V318 75 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 H0YJW9 148 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 RRHO14718 337 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 ATP6V0E1O15342 81 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 GSTP1P09211 210 aaKnown RBP8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 CD3GP09693 182 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 RAB3BP20337 219 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 PPIFP30405 207 aaKnown RBP8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 SERPINB10P48595 397 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 RAB25P57735 213 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 GABARAPL2P60520 117 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 PLA2G7Q13093 441 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 DEFB121Q5J5C9 76 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 ZNF660Q6AZW8 331 aaPredicted RBP8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 OR5AN1Q8NGI8 311 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 C4orf3Q8WVX3 66 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 RAB3CQ96E17 227 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 PARP11Q9NR21 331 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 ZNF221Q9UK13 617 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 RNF150Q9ULK6 438 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 WASHC3Q9Y3C0 194 aa8.25□□□□□ -1.09
PDGFRB-203ENST00000517660 IGKV1-6A0A0C4DH72 117 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 H7C2Y5 167 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 FABP7O15540 132 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 PROP1O75360 226 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 RAB6AP20340 208 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 GADD45AP24522 165 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 RPL5P46777 297 aaKnown RBP8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 OR10A3P58181 314 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 CX3CL1P78423 397 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 CD69Q07108 199 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 KIAA0141Q14154 515 aaPredicted RBP8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 PLGLAQ15195 96 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 UBE2UQ5VVX9 321 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 GLDNQ6ZMI3 551 aaPredicted RBP8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 ZNF491Q8N8L2 437 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 MINDY2Q8NBR6 621 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 TSPAN14Q8NG11 270 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 OR4A4PQ8NGN8 299 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 OR5M8Q8NGP6 311 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 OR10R2Q8NGX6 335 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 MYOZ3Q8TDC0 251 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 UBE2E2Q96LR5 201 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 TOLLIPQ9H0E2 274 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 KLK15Q9H2R5 256 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 FBXL15Q9H469 300 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 RDH8Q9NYR8 311 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 NDUFA13Q9P0J0 144 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 VSIG4Q9Y279 399 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 KCNK7Q9Y2U2 307 aa8.24□□□□□ -1.09
PDGFRB-203ENST00000517660 PLECQ15149 4684 aaKnown RBP8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 SMIM31A0A1B0GVY4 71 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 METTL21EPA6NDL7 271 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 RAB27BO00194 218 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 FCN1O00602 326 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 TFAP2AP05549 437 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 FCGR3AP08637 254 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 GNB3P16520 340 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 RAB9AP51151 201 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 CRIP2P52943 208 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 DGCR2P98153 550 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 RUNX1Q01196 453 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 TMEM267Q0VDI3 215 aaPredicted RBP8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 PSG5Q15238 335 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 DEFB136Q30KP8 78 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 MOGAT2Q3SYC2 334 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 KCTD21Q4G0X4 260 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 C22orf42Q6IC83 251 aa8.23□□□□□ -1.09
PDGFRB-203ENST00000517660 SPARTQ8N0X7 666 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms