RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 AKAP13Q12802 2813 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 FRYLO94915 3013 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 MDFIC2A0A1B0GVS7 189 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 ZNF705FA8MVS1 300 aaPredicted RBP0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 hCG_2039718K7EN88 272 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 POLR3GO15318 223 aaPredicted RBP0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 CDK14O94921 469 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 CRYGCP07315 174 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 BGNP21810 368 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 ANGPTL6Q8NI99 470 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 FAAP24Q9BTP7 215 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 SCAF11Q99590 1463 aaKnown RBP0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 F8P00451 2351 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 CRYBG3Q68DQ2 2970 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 MADDQ8WXG6 1647 aa0.71□□□□□ -2.3
SCARNA1-201ENST00000517138 WNK1Q9H4A3 2382 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 DISP1Q96F81 1524 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 DICER1Q9UPY3 1922 aaKnown RBP0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 SMG1Q96Q15 3661 aaKnown RBP0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 NCOA6Q14686 2063 aaPredicted RBP0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 WIZO95785 1651 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 MYOM1P52179 1685 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 RFPL4AA6NLU0 287 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 RFPL4AL1F8VTS6 287 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 STAG3L2P0CL84 134 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 TSPEAR-AS2P59090 65 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 SLC35A2P78381 396 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 LRRC28Q86X40 367 aaPredicted RBP0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 LGALS14Q8TCE9 139 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 CYSTM1Q9H1C7 97 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 OR51E2Q9H255 320 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 FRYQ5TBA9 3013 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 DIP2BQ9P265 1576 aa0.7□□□□□ -2.3
SCARNA1-201ENST00000517138 EHBP1L1Q8N3D4 1523 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 ADGBQ8N7X0 1667 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 CDH23Q9H251 3354 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 CASP8AP2Q9UKL3 1982 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 TMSB15BA0A087X1C1 80 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 UBDO15205 165 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 AQP5P55064 265 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 ZNF90Q03938 601 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 SLC38A11Q08AI6 406 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 PDK2Q15119 407 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 MAPK14Q16539 360 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 HSP90AA4PQ58FG1 418 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 ASCC1Q8N9N2 400 aaKnown RBP0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 OR13C9Q8NGT0 318 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 TMBIM4Q9HC24 238 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 BABAM2Q9NXR7 383 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 OTOGQ6ZRI0 2925 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 SMARCA2P51531 1590 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 NRKQ7Z2Y5 1582 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 RB1CC1Q8TDY2 1594 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 UNC13AQ9UPW8 1703 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 PRRC2CQ9Y520 2896 aaKnown RBP0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 DNAH14Q0VDD8 3507 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 EFCAB6Q5THR3 1501 aa0.69□□□□□ -2.3
SCARNA1-201ENST00000517138 DOPEY2Q9Y3R5 2298 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 ZNF532Q9HCE3 1301 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 NBPF19A0A087WUL8 3843 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 MGAT4DA6NG13 374 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 BOLA2-SMG1P6H3BVE0 249 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 FBP1P09467 338 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 NWD1Q149M9 1564 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 ZNF791Q3KP31 576 aaPredicted RBP0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 CAVIN4Q5BKX8 364 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 DOLPP1Q86YN1 238 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 ZNF321PQ8N8H1 164 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 IFT46Q9NQC8 304 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 CLEC2DQ9UHP7 191 aa0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 PUS1Q9Y606 427 aaKnown RBP eCLIP0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 VIRMAQ69YN4 1812 aaKnown RBP0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 RBBP6Q7Z6E9 1792 aaKnown RBP0.68□□□□□ -2.3
SCARNA1-201ENST00000517138 LRP6O75581 1613 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 CHD1O14646 1710 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 CRHBPP24387 322 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 RPA3P35244 121 aaPredicted RBP0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 DNASE1L1P49184 302 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 ERHP84090 104 aaKnown RBP0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 HENMT1Q5T8I9 393 aaKnown RBP0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 ZBTB8OSQ8IWT0 167 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 OR4P4Q8NGL7 312 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 GTSF1LQ9H1H1 148 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 SOX21Q9Y651 276 aaPredicted RBP0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 ACANP16112 2415 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 TMEM131LA2VDJ0 1609 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 KIAA0556O60303 1618 aa0.67□□□□□ -2.3
SCARNA1-201ENST00000517138 BRWD1Q9NSI6 2320 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 UBFD1O14562 309 aaKnown RBP0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 ZMPSTE24O75844 475 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 CD164Q04900 197 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 DTD1Q8TEA8 209 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 SLC35G5Q96KT7 338 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 Q96M85 177 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 MND1Q9BWT6 205 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 FIS1Q9Y3D6 152 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 CPAMD8Q8IZJ3 1885 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 NIPBLQ6KC79 2804 aaeCLIP0.66□□□□□ -2.35e-10■■■□□ 15.8
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms