RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 LPAR6P43657 344 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 AKR1C2P52895 323 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RPL30P62888 115 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR2B11Q5JQS5 317 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 UTF1Q5T230 341 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 THOC7Q6I9Y2 204 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LAMTOR1Q6IAA8 161 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C11orf87Q6NUJ2 197 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SLC25A48Q6ZT89 311 aaKnown RBP6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SPAG16Q8N0X2 631 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LYG1Q8N1E2 194 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZBTB8BQ8NAP8 495 aaPredicted RBP6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C8orf46Q8TAG6 207 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 S1PR3Q99500 378 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PLSCR3Q9NRY6 295 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FAM212BQ9NTI7 297 aaPredicted RBP6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZFP57Q9NU63 452 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 BOLA1Q9Y3E2 137 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SESN1Q9Y6P5 492 aa6.27□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ARID1AO14497 2285 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LOC105371242A0A075B767 164 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A087X0M5 115 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SAA2-SAA4A0A096LPE2 208 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A1B0GX30 115 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LINC00473A8K010 186 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 L7N2F9 121 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ATG12O94817 140 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SAA2P0DJI9 122 aaPredicted RBP6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IGHV1-8P0DP01 117 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SLC25A4P12235 298 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C4BPBP20851 252 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 DUTP33316 252 aaKnown RBP6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 KIR2DS2P43631 304 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 THBS3P49746 956 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ATP5J2P56134 94 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ERVFRD-1P60508 538 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 S100A10P60903 97 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IL15RAQ13261 267 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 SMCO1Q147U7 214 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LGALSLQ3ZCW2 172 aaPredicted RBP6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF585BQ52M93 769 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RPL39P5Q59GN2 51 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 NMSQ5H8A3 153 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PRSS54Q6PEW0 395 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TMEM65Q6PI78 240 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF546Q86UE3 836 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ODF3L1Q8IXM7 274 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF295-AS1Q8N0V1 137 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C8orf31Q8N9H6 132 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LY6G5BQ8NDX9 201 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR9G1Q8NH87 305 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 CD300LFQ8TDQ1 290 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LSM10Q969L4 123 aaKnown RBP6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RRNAD1Q96FB5 475 aaKnown RBP6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ADTRPQ96IZ2 230 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 BPESC1Q9GZL8 116 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TMEM133Q9H2Q1 129 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 MBD2Q9UBB5 411 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PRELID3BQ9Y3B1 194 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ARHGAP32A7KAX9 2087 aa6.26□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C22orf46C9J442 243 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 J3QR06 171 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 NDUFS8O00217 210 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TOR1AO14656 332 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RBFOX2O43251 390 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RAMP3O60896 148 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PROP1O75360 226 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IGKV1-39P01597 117 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IGHV2-5P01817 119 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RLN2P04090 185 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IGKV1D-39P04432 117 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 CXCL2P19875 107 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 EPHA1P21709 976 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 IL3RAP26951 378 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 NUP62P37198 522 aaPredicted RBP6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF816Q0VGE8 651 aaPredicted RBP6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 RAB32Q13637 225 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 NCR3LG1Q68D85 454 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 CLEC2AQ6UVW9 174 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF833PQ6ZTB9 187 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FOXRED2Q8IWF2 684 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 C11orf42Q8N5U0 333 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LINC00311Q8N616 119 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 INO80EQ8NBZ0 244 aaPredicted RBP6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 OR10X1Q8NGY0 326 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF596Q8TC21 504 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 DCUN1D4Q92564 292 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 FAM168AQ92567 244 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TNFRSF14Q92956 283 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ZNF251Q9BRH9 671 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 PIMREGQ9BSJ6 248 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 MFFQ9GZY8 342 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 ONECUT1Q9UBC0 465 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 TNFSF18Q9UNG2 199 aa6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 LSM5Q9Y4Y9 91 aaKnown RBP6.25□□□□□ -1.41
SCARNA20.1-201ENST00000516009 CRYBG3Q68DQ2 2970 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A0D9SG52 128 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 A0A1B0GU03 582 aa6.24□□□□□ -1.41
SCARNA20.1-201ENST00000516009 H0YIZ8 118 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms