RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TMEM223A0PJW6 202 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 TMEM72A0PK05 275 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 C9JQL5 133 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 H0YJW9 148 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 FFAR1O14842 300 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 MAGEB4O15481 346 aaPredicted RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 PLIN3O60664 434 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 SCO1O75880 301 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 RBBP9O75884 186 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 DHRS3O75911 302 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 DCTN3O75935 186 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 CA2P00918 260 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 IGKV3-11P04433 115 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 CALB1P05937 261 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 CD99P14209 185 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 SPNP16150 400 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 ZNF7P17097 686 aaPredicted RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 CASP1P29466 404 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 GRPRP30550 384 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 PYCR1P32322 319 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 IFNGR2P38484 337 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 CBX5P45973 191 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 AP2S1P53680 142 aaPredicted RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 RPL26P61254 145 aaKnown RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 BASP1P80723 227 aaKnown RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 CDC20Q12834 499 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 PAFAH1B3Q15102 231 aaKnown RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 C4orf26Q17RF5 130 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 AKIRIN2Q53H80 203 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 SPIN4Q56A73 249 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 YIF1BQ5BJH7 314 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 CYB5R2Q6BCY4 276 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 TTC33Q6PID6 262 aaPredicted RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 GALNT10Q86SR1 603 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 UMODL1-AS1Q8N2C9 162 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 MUC15Q8N387 334 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 SLC25A29Q8N8R3 303 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 OR4K5Q8NGD3 323 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 OR5M1Q8NGP8 315 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 PDXPQ96GD0 296 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 NARS2Q96I59 477 aaKnown RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 C18orf15Q96N68 181 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 CHCHD7Q9BUK0 85 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 NUDT9Q9BW91 350 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 METTL17Q9H7H0 456 aaPredicted RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 C12orf10Q9HB07 376 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 TAS2R9Q9NYW1 312 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 ZNRD1Q9P1U0 126 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 RWDD2AQ9UIY3 292 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 DNAJC12Q9UKB3 198 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 RAB26Q9ULW5 256 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 RPL26L1Q9UNX3 145 aaKnown RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 KLF13Q9Y2Y9 288 aaPredicted RBP1.99□□□□□ -2.09
HERC4-215ENST00000515753 U3KQA8 63 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 FANCMQ8IYD8 2048 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 DCHS1Q96JQ0 3298 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 ACACBO00763 2458 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 REV3LO60673 3130 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 DOCK5Q9H7D0 1870 aa1.99□□□□□ -2.09
HERC4-215ENST00000515753 DOCK8Q8NF50 2099 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 C5orf42Q9H799 3197 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 CFAP54Q96N23 3096 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 MYH9P35579 1960 aaKnown RBP1.98□□□□□ -2.09
HERC4-215ENST00000515753 ATG2AQ2TAZ0 1938 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 MIA3Q5JRA6 1907 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 TRAV8-3A0A0A6YYJ7 113 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 A0A1W2PP18 115 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 SIGLEC16A6NMB1 481 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 CXCR6O00574 342 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 ACOX3O15254 700 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 GYG2O15488 501 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 TGOLN2O43493 480 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 SULT1B1O43704 296 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 COX7A2P2O60397 106 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 HLA-DQA1P01909 254 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 MAS1P04201 325 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 TYMSP04818 313 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 CTXN2P0C2S0 81 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 CCL4P13236 92 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 CFL1P23528 166 aaKnown RBP1.98□□□□□ -2.09
HERC4-215ENST00000515753 SLCO1A2P46721 670 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 CCR6P51684 374 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 AP3S2P59780 193 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 TPI1P60174 286 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 ACTBP60709 375 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 ACTG1P63261 375 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 MRPS25P82663 173 aaKnown RBP1.98□□□□□ -2.09
HERC4-215ENST00000515753 MEF2CQ06413 473 aaPredicted RBP1.98□□□□□ -2.09
HERC4-215ENST00000515753 ZNF235Q14590 738 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 SSX1Q16384 188 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 DEFB109BQ30KR1 87 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 KRTAP21-3Q3LHN1 58 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 RNASE13Q5GAN3 156 aaKnown RBP1.98□□□□□ -2.09
HERC4-215ENST00000515753 TEX30Q5JUR7 227 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 UBE2NLQ5JXB2 153 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 GLYATQ6IB77 296 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
HERC4-215ENST00000515753 TNFAIP8L2Q6P589 184 aaPredicted RBP1.98□□□□□ -2.09
HERC4-215ENST00000515753 DCUN1D2Q6PH85 259 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms