RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 FAM181AQ8N9Y4 354 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 AQP3Q92482 292 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 C5orf66Q9H5L9 145 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 CARHSP1Q9Y2V2 147 aaKnown RBP11.51□□□□□ -0.57
TCOF1-214ENST00000515035 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
TCOF1-214ENST00000515035 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 MIC13Q5XKP0 118 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 LAIR2Q6ISS4 152 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 AMELYQ99218 206 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 A8MXK9 166 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 PIN1P1O15428 100 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 LINC00869P0C866 280 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 CALHM1Q8IU99 346 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 NFAM1Q8NET5 270 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-214ENST00000515035 OR52M1Q8NGK5 317 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 TMUB1Q9BVT8 246 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 DNAJC4Q9NNZ3 241 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 INSIG2Q9Y5U4 225 aa11.51□□□□□ -0.57
TCOF1-214ENST00000515035 SPTA1P02549 2419 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 RPS11P62280 158 aaKnown RBP eCLIP11.5□□□□□ -0.57
TCOF1-214ENST00000515035 ST6GALNAC3Q8NDV1 305 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 OR5R1Q8NH85 324 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 LHX9Q9NQ69 397 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 HSPB7Q9UBY9 170 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 BRWD3Q6RI45 1802 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 EML2O95834 649 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 GAB4Q2WGN9 574 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 MMD2Q8IY49 270 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 SDHCQ99643 169 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-214ENST00000515035 DTX4Q9Y2E6 619 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 ADAMTSL1Q8N6G6 1762 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 A0A1W2PPE3 182 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 GCM2O75603 506 aaPredicted RBP11.5□□□□□ -0.57
TCOF1-214ENST00000515035 SCTP09683 121 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 ASAH2BP0C7U1 165 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 RND1Q92730 232 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 SPOCK3Q9BQ16 436 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 A0A0U1RQV5 110 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 DPRXA6NFQ7 191 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 RNF7Q9UBF6 113 aa11.5□□□□□ -0.57
TCOF1-214ENST00000515035 SCN3AQ9NY46 2000 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 UPK3AO75631 287 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 UNC119Q13432 240 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 OR10AG1Q8NH19 301 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 GPR146Q96CH1 333 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 PGPA6NDG6 321 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 ROM1Q03395 351 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 FAM131CQ96AQ9 280 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 C1RLQ9NZP8 487 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 ZDHHC8Q9ULC8 765 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 CEACAM18A8MTB9 384 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 PLAUP00749 431 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 CD8AP01732 235 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 SSTR5P35346 364 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 SELENOTP62341 195 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 ATRAIDQ6UW56 229 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 TRBV5-7A0A0A0MS05 114 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 SNRNP200O75643 2136 aaKnown RBP11.49□□□□□ -0.57
TCOF1-214ENST00000515035 TMEM177Q53S58 311 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 TMEM52Q8NDY8 209 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 SLC25A40Q8TBP6 338 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 OR8B2Q96RD0 313 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 SCNM1Q9BWG6 230 aa11.49□□□□□ -0.57
TCOF1-214ENST00000515035 TRBV9A0A0B4J1U6 114 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 C21orf140B9A014 251 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
TCOF1-214ENST00000515035 PRSS2P07478 247 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 NUBP1P53384 320 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 ZNF385AQ96PM9 386 aaKnown RBP11.48□□□□□ -0.57
TCOF1-214ENST00000515035 CKAP5Q14008 2032 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 CBLN1P23435 193 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 HIKESHIQ53FT3 197 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 KRTCAP3Q53RY4 240 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 LAMTOR1Q6IAA8 161 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-214ENST00000515035 UNC13CQ8NB66 2214 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 TMEM210A6NLX4 147 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 FGF12P61328 243 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 EFNB1P98172 346 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 NIT1Q86X76 327 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 FGFRL1Q8N441 504 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 TPRX1Q8N7U7 411 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 RAB1CQ92928 201 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 GDF15Q99988 308 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 PMCHL2Q9BQD1 86 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 LMX1BO60663 402 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 PGLYRP1O75594 196 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-214ENST00000515035 ZP1P60852 638 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 C2orf68Q2NKX9 166 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 POC1AQ8NBT0 407 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
TCOF1-214ENST00000515035 NEU1Q99519 415 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms