RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, human

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIL1-215	ENST00000515008	FHL3	Q13643	280 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	TMEM65	Q6PI78	240 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	TCTEX1D1	Q8N7M0	179 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	OR4A4P	Q8NGN8	299 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	UBE2E2	Q96LR5	201 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	DUX3	Q96PT4	197 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	TOLLIP	Q9H0E2	274 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	ZNF221	Q9UK13	617 aa		13.8	□□□□□ -0.2
SIL1-215	ENST00000515008	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	IGLV1-40	P01703	118 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	GSTP1	P09211	210 aa	Known RBP	13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	RAB3B	P20337	219 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	RAB25	P57735	213 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	RUNX1	Q01196	453 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	DEFB136	Q30KP8	78 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	MINDY2	Q8NBR6	621 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	CABLES2	Q9BTV7	478 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	FBXL15	Q9H469	300 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008		Q9H521	79 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	WSB1	Q9Y6I7	421 aa		13.79	□□□□□ -0.2
SIL1-215	ENST00000515008	IGKV1-6	A0A0C4DH72	117 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	SHISA3	A0PJX4	238 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008		G3V318	75 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008		H7C2Y5	167 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	FABP7	O15540	132 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	SPDEF	O95238	335 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	ATP6V1G2	O95670	118 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	FCGR3A	P08637	254 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	OR10A3	P58181	314 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	NDP	Q00604	133 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	PLGLA	Q15195	96 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	UBE2U	Q5VVX9	321 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	OR10R2	Q8NGX6	335 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	FCGR1B	Q92637	280 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	CENPO	Q9BU64	300 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	RDH8	Q9NYR8	311 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	VSIG4	Q9Y279	399 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	KCNK7	Q9Y2U2	307 aa		13.78	□□□□□ -0.2
SIL1-215	ENST00000515008	METTL21EP	A6NDL7	271 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	MFNG	O00587	321 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	RAMP3	O60896	148 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	APOA2	P02652	100 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	TFAP2A	P05549	437 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	HIST1H1D	P16402	221 aa	Known RBP	13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	DGCR2	P98153	550 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	PLA2G7	Q13093	441 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	ARL6IP1	Q15041	203 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	C19orf54	Q5BKX5	351 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	C9orf66	Q5T8R8	295 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	PDPN	Q86YL7	162 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	ZNF491	Q8N8L2	437 aa		13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	TSNAX	Q99598	290 aa	Known RBP	13.77	□□□□□ -0.21
SIL1-215	ENST00000515008	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.77	□□□□□ -0.21
SIL1-215	ENST00000515008		I3L521	148 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	RAB27B	O00194	218 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	PROP1	O75360	226 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	OR8U8	P0C7N1	319 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	FGF9	P31371	208 aa	Predicted RBP	13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	RAB9A	P51151	201 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	CX3CL1	P78423	397 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	KIAA0141	Q14154	515 aa	Predicted RBP	13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	MOGAT2	Q3SYC2	334 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	C22orf42	Q6IC83	251 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	PYHIN1	Q6K0P9	492 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	ZNF383	Q8NA42	475 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	KLK15	Q9H2R5	256 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	RNF150	Q9ULK6	438 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	GAB2	Q9UQC2	676 aa		13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	FOXA2	Q9Y261	457 aa	Predicted RBP	13.76	□□□□□ -0.21
SIL1-215	ENST00000515008	PSMB9	P28065	219 aa		13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	ECSCR	Q19T08	205 aa		13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	SPART	Q8N0X7	666 aa		13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	OR11H1	Q8NG94	326 aa		13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	OR10J5	Q8NHC4	309 aa		13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	GNB4	Q9HAV0	340 aa		13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	METTL1	Q9UBP6	276 aa	Known RBP	13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	FBXO7	Q9Y3I1	522 aa		13.75	□□□□□ -0.21
SIL1-215	ENST00000515008	TRBV6-7	A0A0A0MS04	114 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008		A0A1W2PN81	502 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	NOTO	A8MTQ0	251 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008		M0R1X1	148 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	BET1	O15155	118 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	IGKV1-16	P04430	117 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	GNB3	P16520	340 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	CHRNA7	P36544	502 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	ZNF616	Q08AN1	781 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	PSG5	Q15238	335 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	DEFB121	Q5J5C9	76 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	ZNF562	Q6V9R5	426 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008		Q6ZS49	121 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	ABHD5	Q8WTS1	349 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	OR2D2	Q9H210	308 aa		13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
SIL1-215	ENST00000515008	STUB1	Q9UNE7	303 aa		13.74	□□□□□ -0.21

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