RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PUS1Q9Y606 427 aaKnown RBP eCLIP1.78□□□□□ -2.12
HMGCS1-207ENST00000514610 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 FTCDNL1E5RQL4 147 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 ATP5G1P05496 136 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 ALOX5APP20292 161 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 CFL1P23528 166 aaKnown RBP1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 ATP6V0CP27449 155 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 H2BFSP57053 126 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 TBC1D28Q2M2D7 210 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 PARVAQ9NVD7 372 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 TP53TG1Q9Y2A0 90 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 GMEB1Q9Y692 573 aa1.77□□□□□ -2.13
HMGCS1-207ENST00000514610 SLX4Q8IY92 1834 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 IGHV3-15A0A0B4J1V0 119 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 OR5K4A6NMS3 321 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 CCRL2O00421 344 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 SLC17A3O00476 420 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 UBFD1O14562 309 aaKnown RBP1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 AZIN1O14977 448 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 CRYBA1P05813 215 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 PET100P0DJ07 73 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 PSMB6P28072 239 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 OR10J1P30954 320 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 DNAL1Q4LDG9 190 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 TMEM31Q5JXX7 168 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 SPATA24Q86W54 205 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 OR7G1Q8NGA0 311 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 TLCD1Q96CP7 247 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 MROQ9BYG7 248 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 EIF5A2Q9GZV4 153 aaKnown RBP1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 WDR54Q9H977 334 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 PSMD13Q9UNM6 376 aa1.76□□□□□ -2.13
HMGCS1-207ENST00000514610 PXDNLA1KZ92 1463 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 DOCK10Q96BY6 2186 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 FABP12A6NFH5 140 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 COPEO14579 308 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 GNRH2O43555 120 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 CXCL2P19875 107 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 CA7P43166 264 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 CD151P48509 253 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 HPCAP84074 193 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 FUNDC1Q8IVP5 155 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 C1orf174Q8IYL3 243 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 OR10D3Q8NH80 312 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 DCANP1Q8TF63 244 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 FGF13Q92913 245 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 EURLQ9NYK6 297 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 PRO2289Q9P1D8 64 aa1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 EIF4G1Q04637 1599 aaKnown RBP1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 NYNRINQ9P2P1 1898 aaKnown RBP1.75□□□□□ -2.13
HMGCS1-207ENST00000514610 RIMS2Q9UQ26 1411 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 NCKAP5O14513 1909 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 GRIFINA4D1Z8 144 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 ZNF860A6NHJ4 632 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 OR11H12B2RN74 326 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 CALUO43852 315 aaPredicted RBP1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 LINC00614P0C842 121 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 CXCL3P19876 107 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 MIPP30301 263 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 CRATP43155 626 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 TAS2R45P59539 299 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 DMTNQ08495 405 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 AGTRAPQ6RW13 159 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 GLT6D1Q7Z4J2 308 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 SLC35F6Q8N357 371 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 CNEP1R1Q8N9A8 125 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 OR11H2Q8NH07 326 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 ZNF625Q96I27 306 aaPredicted RBP1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 ZNF514Q96K75 400 aaPredicted RBP1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 C7orf50Q9BRJ6 194 aaKnown RBP1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 NKX6-2Q9C056 277 aaPredicted RBP1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 SLC2A9Q9NRM0 540 aa1.74□□□□□ -2.13
HMGCS1-207ENST00000514610 PIK3R4Q99570 1358 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 RAD50Q92878 1312 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 GOLGA6L10A6NI86 522 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 M0R381 172 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 ATP8B1O43520 1251 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 GSTZ1O43708 216 aaPredicted RBP1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 PSMG1O95456 288 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 IGHV1-69P01742 117 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 ZNF728P0DKX0 622 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 CDK9P50750 372 aaKnown RBP1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 SKP1P63208 163 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 PRDX4Q13162 271 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 AMTNQ6UX39 209 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 ZNF283Q8N7M2 679 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 OR2D3Q8NGH3 330 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 OR4X1Q8NH49 305 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 SLC37A2Q8TED4 501 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 Q8WTZ3 238 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 CYGBQ8WWM9 190 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 NSRP1Q9H0G5 558 aaKnown RBP1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 MS4A6AQ9H2W1 248 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 HDGFL3Q9Y3E1 203 aa1.73□□□□□ -2.13
HMGCS1-207ENST00000514610 WDR90Q96KV7 1748 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 TRAV8-1A0A0A6YYK1 113 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 TINCRA0A1B0GVN0 87 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 TMEM235A6NFC5 223 aa1.72□□□□□ -2.13
HMGCS1-207ENST00000514610 PEBP1P30086 187 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms