RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 TSNAXQ99598 290 aaKnown RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 CMSS1Q9BQ75 279 aaKnown RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 HSPB9Q9BQS6 159 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 AGMATQ9BSE5 352 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 NICN1Q9BSH3 213 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 MRPL20Q9BYC9 149 aaKnown RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 C11orf54Q9H0W9 315 aaPredicted RBP5.71□□□□□ -1.5
HTT-212ENST00000513639 C12orf4Q9NQ89 552 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 AK3Q9UIJ7 227 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 WASHC3Q9Y3C0 194 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 WSB1Q9Y6I7 421 aa5.71□□□□□ -1.5
HTT-212ENST00000513639 IGHV7-81A0A0B4J1V7 117 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 SEC14L6B5MCN3 397 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 RRHO14718 337 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 MRPS14O60783 128 aaKnown RBP5.7□□□□□ -1.5
HTT-212ENST00000513639 NDUFA3O95167 84 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 DIRAS3O95661 229 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 CD3GP09693 182 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 GALP22466 123 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 GADD45AP24522 165 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 LGALS7P47929 136 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 TMEM50BP56557 158 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 RPS25P62851 125 aaKnown RBP5.7□□□□□ -1.5
HTT-212ENST00000513639 CX3CL1P78423 397 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 FABP5Q01469 135 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 C18orf65Q6ZTR6 163 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 C5orf24Q7Z6I8 188 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 ZNF491Q8N8L2 437 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.7□□□□□ -1.5
HTT-212ENST00000513639 OR4A4PQ8NGN8 299 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 FLYWCH2Q96CP2 140 aaKnown RBP5.7□□□□□ -1.5
HTT-212ENST00000513639 RAB3CQ96E17 227 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 ARHGAP5-AS1Q96IT6 56 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 B9D2Q9BPU9 175 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 PECRQ9BY49 303 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 IFI27L2Q9H2X8 130 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 Q9N2K0 584 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 PARP11Q9NR21 331 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 GAB2Q9UQC2 676 aa5.7□□□□□ -1.5
HTT-212ENST00000513639 A0A0A6YYD4 124 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 G3V318 75 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 H0YJW9 148 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 I3L521 148 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 APOA2P02652 100 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 TFAP2AP05549 437 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 SCTP09683 121 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 RAB6AP20340 208 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 MYL9P24844 172 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 CNTFRP26992 372 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 TALDO1P37837 337 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 MAP2K4P45985 399 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 CRIP2P52943 208 aaPredicted RBP5.69□□□□□ -1.5
HTT-212ENST00000513639 RPS16P62249 146 aaKnown RBP5.69□□□□□ -1.5
HTT-212ENST00000513639 HLA-DRB3P79483 266 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 ZNF616Q08AN1 781 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 CBX3Q13185 183 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 FHL3Q13643 280 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 KIAA0141Q14154 515 aaPredicted RBP5.69□□□□□ -1.5
HTT-212ENST00000513639 PSG5Q15238 335 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 TBCEQ15813 527 aaPredicted RBP5.69□□□□□ -1.5
HTT-212ENST00000513639 SRSF7Q16629 238 aaKnown RBP eCLIP5.69□□□□□ -1.5
HTT-212ENST00000513639 ACTBL2Q562R1 376 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 RPL39P5Q59GN2 51 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 CD200R1LQ6Q8B3 271 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 FAM131AQ6UXB0 335 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 ZNF367Q7RTV3 350 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 ZNF429Q86V71 674 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 PPP1R27Q86WC6 154 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 OR10J5Q8NHC4 309 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 MYOZ3Q8TDC0 251 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 ABHD14BQ96IU4 210 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 TMEM68Q96MH6 324 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 DUX3Q96PT4 197 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 GFI1Q99684 422 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 YTHDF1Q9BYJ9 559 aaKnown RBP5.69□□□□□ -1.5
HTT-212ENST00000513639 TOLLIPQ9H0E2 274 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 KLK15Q9H2R5 256 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 SLA2Q9H6Q3 261 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.69□□□□□ -1.5
HTT-212ENST00000513639 RAB26Q9ULW5 256 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 FOXA2Q9Y261 457 aaPredicted RBP5.69□□□□□ -1.5
HTT-212ENST00000513639 NUBP2Q9Y5Y2 271 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 STAB2Q8WWQ8 2551 aa5.69□□□□□ -1.5
HTT-212ENST00000513639 SORL1Q92673 2214 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 DNAH9Q9NYC9 4486 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 A0A0G2JLM5 398 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 TMEM272A0A1B0GTI8 110 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 TRDV1A0A1B0GX56 115 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 IFITM5A6NNB3 132 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 FOXI3A8MTJ6 420 aaPredicted RBP5.68□□□□□ -1.5
HTT-212ENST00000513639 FCN1O00602 326 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 LDLRAD4O15165 306 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 ATP6V0E1O15342 81 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 FABP7O15540 132 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 SPDEFO95238 335 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 CNIH1O95406 144 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 CTXN2P0C2S0 81 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 RRASP10301 218 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 RAB3BP20337 219 aa5.68□□□□□ -1.5
HTT-212ENST00000513639 ECI1P42126 302 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms