RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RBP2P50120 134 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 ZNF137PP52743 207 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 ATP1B3P54709 279 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 ACTR3P61158 418 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 SNRPEP62304 92 aaKnown RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 BNIP1Q12981 228 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 RBMY1FQ15415 496 aaKnown RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 DEFB114Q30KQ6 69 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 TNFAIP8L3Q5GJ75 292 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 SAMD4BQ5PRF9 694 aaKnown RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 METTL21CQ5VZV1 264 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 SLC25A26Q70HW3 274 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 VTCN1Q7Z7D3 282 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 NFE4Q86UQ8 179 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 ERI1Q8IV48 349 aaKnown RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 KIR2DL5AQ8N109 375 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 LINC00471Q8N535 108 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 SLC37A3Q8NCC5 494 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 NPBQ8NG41 125 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 OR51T1Q8NGJ9 327 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 OR6K6Q8NGW6 343 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 OR6N2Q8NGY6 317 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 KIR2DL5BQ8NHK3 375 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 C11orf45Q8TAV5 145 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 OR51E1Q8TCB6 317 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 GNPDA2Q8TDQ7 276 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 THEM6Q8WUY1 208 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 C10orf35Q96D05 121 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 RCN3Q96D15 328 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 AMELYQ99218 206 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 TEAD3Q99594 435 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 GFI1Q99684 422 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 MROQ9BYG7 248 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 PBOV1Q9GZY1 135 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 COMMD4Q9H0A8 199 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 HMG20AQ9NP66 347 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 EXOSC4Q9NPD3 245 aaKnown RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 ZC4H2Q9NQZ6 224 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 FAM118AQ9NWS6 357 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 FAM206AQ9NX38 181 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 CALYQ9NYX4 217 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 CNOT2Q9NZN8 540 aaKnown RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 NUFIP1Q9UHK0 495 aaKnown RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 FOXA2Q9Y261 457 aaPredicted RBP2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 U3KQV3 271 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 V9GYS6 101 aa2.68□□□□□ -1.98
PDLIM5-218ENST00000513341 IGHV3-72A0A0B4J1Y9 119 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 TRBV4-1A0A0J9YWV2 114 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 A0A1B0GTI1 187 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 C13orf42A0A1B0GVH6 325 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 FAM230AA0A1W2PPH8 454 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 FAM220BPB1ANY3 271 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 EPM2AB3EWF7 344 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 LGALS9O00182 355 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 SIRPB1O00241 398 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 DEGS1O15121 323 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 NBR2O15453 112 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ENTPD6O75354 484 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 GATBO75879 557 aaKnown RBP2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 IGHV3-11P01762 117 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 GYPBP06028 91 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 P0DMU3 169 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 FAM231AP0DMU4 169 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 FAM231CP0DMU5 169 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 PRKACAP17612 351 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 BLVRBP30043 206 aaPredicted RBP2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 MAP2K4P45985 399 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 SYNJ2BPP57105 145 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ACTBP60709 375 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ARL16Q0P5N6 197 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 UBE2V1Q13404 147 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 CRMP1Q14194 572 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 MMDQ15546 238 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 C5orf64Q2M2E5 130 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 FAM98BQ52LJ0 330 aaKnown RBP2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 C14orf177Q52M58 125 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ACTBL2Q562R1 376 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 IGSF11Q5DX21 431 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 UTF1Q5T230 341 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ZNF562Q6V9R5 426 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 RASSF6Q6ZTQ3 369 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 COMMD2Q86X83 199 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 KRTAP7-1Q8IUC3 87 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ZNF679Q8IYX0 411 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 SAXO1Q8IYX7 474 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ELMOD2Q8IZ81 293 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 POM121L12Q8N7R1 296 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 DMBX1Q8NFW5 382 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 TSPAN14Q8NG11 270 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 OR52I2Q8NH67 350 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 SLAMF9Q96A28 289 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 ASB9Q96DX5 294 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 BORCS8Q96FH0 119 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 COQ2Q96H96 371 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 USMG5Q96IX5 58 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 C7orf34Q96L11 122 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 RNF5Q99942 180 aa2.67□□□□□ -1.98
PDLIM5-218ENST00000513341 EBF4Q9BQW3 602 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms