RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 OPN3Q9H1Y3 402 aaPredicted RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 SPTY2D1-AS1A0A0U1RR47 76 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 RCC1P18754 421 aaPredicted RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 NUDT8Q8WV74 236 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 TMEM189A5PLL7 270 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 WISP3O95389 354 aaPredicted RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 LRRC75BQ2VPJ9 315 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 ZNF645Q8N7E2 425 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 OR2J1Q9GZK6 312 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 TRAV30A0A087WSZ9 112 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 VSIG8P0DPA2 414 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 RND3P61587 244 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 IBA57Q5T440 356 aaKnown RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 ADAD2Q8NCV1 583 aaKnown RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 PLAC1Q9HBJ0 212 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 A0A1W2PQM1 296 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 SYNGR1O43759 233 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 MMP23AO75900 390 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 ZNF774Q6NX45 483 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 LYZL2Q7Z4W2 148 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 MAP1LC3AQ9H492 121 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 CA1P00915 261 aaPredicted RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 PPBPP02775 128 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 WFDC5Q8TCV5 224 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 ANKRD10Q9NXR5 420 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 GPR132Q9UNW8 380 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 IGHMP01871 453 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 ORM2P19652 201 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 MRPL18Q9H0U6 180 aaKnown RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 COL24A1Q17RW2 1714 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 EML2O95834 649 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 MEF2CQ06413 473 aaPredicted RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 PSG9Q00887 426 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 HERPUD1Q15011 391 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 Q5PR19 223 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 LYG1Q8N1E2 194 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 OR4C12Q96R67 309 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 WNT16Q9UBV4 365 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 TRBV6-7A0A0A0MS04 114 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.3□□□□□ -1.24
HTT-208ENST00000510626 A0A1W2PPC1 479 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 ADIPOQQ15848 244 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 RHOVQ96L33 236 aa7.3□□□□□ -1.24
HTT-208ENST00000510626 A0A096LPE4 126 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 A0A1W2PPZ6 126 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 MORN3Q6PF18 240 aaPredicted RBP7.29□□□□□ -1.24
HTT-208ENST00000510626 OR9G4Q8NGQ1 327 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 PGLYRP3Q96LB9 341 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 PRDM13Q9H4Q3 707 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 OR51B2Q9Y5P1 312 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 CEACAM21Q3KPI0 293 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 SLC35E4Q6ICL7 350 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 FAM71F2Q6NXP2 309 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 MRGPRFQ96AM1 343 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 ZNF430Q9H8G1 570 aaPredicted RBP7.29□□□□□ -1.24
HTT-208ENST00000510626 TRAV17A0A0B4J275 112 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 RHOGP84095 191 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 ZNF658BQ4V348 819 aaPredicted RBP7.29□□□□□ -1.24
HTT-208ENST00000510626 ZNF880Q6PDB4 577 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 APCDD1LQ8NCL9 501 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 FLYWCH2Q96CP2 140 aaKnown RBP7.29□□□□□ -1.24
HTT-208ENST00000510626 CKS2P33552 79 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 RBM11P57052 281 aaKnown RBP7.29□□□□□ -1.24
HTT-208ENST00000510626 SSPNQ14714 243 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 FAM27BQ5VT28 67 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 DCAF12L2Q5VW00 463 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 PLXNA1Q9UIW2 1896 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 IGHV1-69-2A0A0G2JMI3 117 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 FOXL1Q12952 345 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 SPEM1Q8N4L4 309 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 TM4SF19Q96DZ7 209 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 C5orf66Q9H5L9 145 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 LYZP61626 148 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 NUTF2P61970 127 aaKnown RBP7.29□□□□□ -1.24
HTT-208ENST00000510626 TRAV8-7A0A075B6U6 113 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 A0A1W2PS18 150 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 BGLAPP02818 100 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 C5orf30Q96GV9 206 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 CLEC5AQ9NY25 188 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 TRGV5A0A0B4J1U4 118 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 ITGB1BP1O14713 200 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 NDUFA2O43678 99 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 FCGR3AP08637 254 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 MESTQ5EB52 335 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 ZNF665Q9H7R5 613 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 KLK13Q9UKR3 277 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 TMEM8BA6NDV4 472 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 NPIPB6E9PJ23 425 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 RBFOX2O43251 390 aaKnown RBP eCLIP7.29□□□□□ -1.247e-8■□□□□ 11
HTT-208ENST00000510626 HOXA4Q00056 320 aaPredicted RBP7.29□□□□□ -1.24
HTT-208ENST00000510626 MYEOVQ96EZ4 313 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 KCNMB2Q9Y691 235 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 ZNF32P17041 273 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 MAS1LP35410 378 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 FGF12P61328 243 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 GCSAMQ8N6F7 178 aa7.29□□□□□ -1.24
HTT-208ENST00000510626 RNF222A6NCQ9 220 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 OR2Z1Q8NG97 314 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 RAB1BQ9H0U4 201 aa7.28□□□□□ -1.24
HTT-208ENST00000510626 K7EQS6 105 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms