RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 C6orf120Q7Z4R8 191 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 RAB43Q86YS6 212 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 COX18Q8N8Q8 333 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 OR4P4Q8NGL7 312 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 C7orf33Q8WU49 177 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 SEH1LQ96EE3 360 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 PIK3IP1Q96FE7 263 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 AURKBQ96GD4 344 aaPredicted RBP2.68□□□□□ -1.98
NUP54-209ENST00000510569 DCUN1D1Q96GG9 259 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 TMEM80Q96HE8 168 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 DNAJC30Q96LL9 226 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 TBX5Q99593 518 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 CDX2Q99626 313 aaPredicted RBP2.68□□□□□ -1.98
NUP54-209ENST00000510569 PITX2Q99697 317 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 CCDC32Q9BV29 185 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 METTL17Q9H7H0 456 aaPredicted RBP2.68□□□□□ -1.98
NUP54-209ENST00000510569 TMEM9BQ9NQ34 198 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 COPZ2Q9P299 210 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 ANXA10Q9UJ72 324 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 UTP11Q9Y3A2 253 aaKnown RBP2.68□□□□□ -1.98
NUP54-209ENST00000510569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.68□□□□□ -1.98
NUP54-209ENST00000510569 LOC285556D6RIA3 1793 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 DOCK5Q9H7D0 1870 aa2.68□□□□□ -1.98
NUP54-209ENST00000510569 LOC100131303A0A0U1RQF7 123 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR4C46A6NHA9 309 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 NCBP2LA6PVI3 153 aaKnown RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 CYB5BO43169 146 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 SLC37A4O43826 429 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 UPK1BO75841 260 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 SUPT7LO94864 414 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 CD55P08174 381 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 SLC35G6P0C7Q6 338 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 PGA4P0DJD7 388 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 PGA3P0DJD8 388 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 PGA5P0DJD9 388 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 ATF1P18846 271 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 TSPOP30536 169 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 PFN2P35080 140 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 CD200P41217 278 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 RPS10P46783 165 aaKnown RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 SERPINB10P48595 397 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 GZMMP51124 257 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 APOC4P55056 127 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 HSPE1P61604 102 aaKnown RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 TBPL1P62380 186 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 ZNF92Q03936 586 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 EMX1Q04741 257 aaPredicted RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 EMX2Q04743 252 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 NRF1Q16656 503 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 RNASE10Q5GAN6 216 aaKnown RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 DNLZQ5SXM8 178 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR2T5Q6IEZ7 315 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 DCUN1D2Q6PH85 259 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 PEX26Q7Z412 305 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 MRPL55Q7Z7F7 128 aaKnown RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 RDH10Q8IZV5 341 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 ST6GALNAC3Q8NDV1 305 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR52E2Q8NGJ4 325 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR51G1Q8NGK1 321 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR10R2Q8NGX6 335 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR2T29Q8NH02 315 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR5J2Q8NH18 312 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 NEIL3Q8TAT5 605 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 NT5CQ8TCD5 201 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 DCUN1D4Q92564 292 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 FGF11Q92914 225 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 BORCS7Q96B45 105 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 LRRC58Q96CX6 371 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 DIRAS2Q96HU8 199 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 FOPNLQ96NB1 174 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 OR52E6Q96RD3 313 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 GPER1Q99527 375 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 SERPINI1Q99574 410 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 MCHR1Q99705 422 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 SULT4A1Q9BR01 284 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 MARVELD1Q9BSK0 173 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 RIOK2Q9BVS4 552 aaKnown RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 VCXQ9H320 206 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 RNF167Q9H6Y7 350 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 HMG20AQ9NP66 347 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 MMP26Q9NRE1 261 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 FAIMQ9NVQ4 179 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 MED29Q9NX70 200 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 TAS2R5Q9NYW4 299 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 SS18L2Q9UHA2 77 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 RIMS3Q9UJD0 308 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 ZNF223Q9UK11 482 aaPredicted RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 MMP17Q9ULZ9 603 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 PSG8Q9UQ74 426 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 YLPM1P49750 1951 aaKnown RBP2.67□□□□□ -1.98
NUP54-209ENST00000510569 PTPRJQ12913 1337 aa2.67□□□□□ -1.98
NUP54-209ENST00000510569 A0A087X0T9 212 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 TRAV8-4A0A0B4J246 113 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 A0A1B0GV50 99 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 A0A1B0GVG6 124 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 FAM92AA1XBS5 289 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 MAP1LC3B2A6NCE7 125 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 OR5H1A6NKK0 313 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 EVPLLA8MZ36 301 aa2.66□□□□□ -1.98
NUP54-209ENST00000510569 E7EQ34 232 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms