RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, human

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-222	ENST00000510545	YPEL2	Q96QA6	119 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	TANC2	Q9HCD6	1990 aa		13.37	□□□□□ -0.27
CLDND1-222	ENST00000510545	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	LOC105371267	A0A1B0GV96	52 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	SLC31A2	O15432	143 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	CLDN14	O95500	239 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	CLDN1	O95832	211 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	FAM157C	P0CG43	387 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	PAX9	P55771	341 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	SWI5	Q1ZZU3	235 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	TCTEX1D2	Q8WW35	142 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	KCNJ16	Q9NPI9	418 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	PLA2G2E	Q9NZK7	142 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	CLN8	Q9UBY8	286 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	SESN1	Q9Y6P5	492 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	DCHS2	Q6V1P9	2916 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	PPIAL4E	A0A075B759	164 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	TRAV38-1	A0A0B4J264	116 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545		B9A039	149 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	PPIAL4D	F5H284	164 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	S1PR2	O95136	353 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	GAPDH	P04406	335 aa	Known RBP	13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	PPIAL4F	P0DN26	164 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	ZP3	P21754	424 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	CAV2	P51636	162 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	SPAG16	Q8N0X2	631 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	EDARADD	Q8WWZ3	215 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	LINC00052	Q96N35	136 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	IFI27L2	Q9H2X8	130 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	MS4A5	Q9H3V2	200 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	PFDN2	Q9UHV9	154 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	PPIAL4A	Q9Y536	164 aa		13.36	□□□□□ -0.27
CLDND1-222	ENST00000510545	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.35	□□□□□ -0.27
CLDND1-222	ENST00000510545	TRGV10	A0A0A0MS01	117 aa		13.35	□□□□□ -0.27
CLDND1-222	ENST00000510545	TNFRSF13B	O14836	293 aa	Predicted RBP	13.35	□□□□□ -0.27
CLDND1-222	ENST00000510545	FGF16	O43320	207 aa		13.35	□□□□□ -0.27
CLDND1-222	ENST00000510545	MMP23A	O75900	390 aa		13.35	□□□□□ -0.27
CLDND1-222	ENST00000510545	LYRM2	Q9NU23	88 aa	Predicted RBP	13.35	□□□□□ -0.27
CLDND1-222	ENST00000510545	GFOD1	Q9NXC2	390 aa		13.35	□□□□□ -0.27
CLDND1-222	ENST00000510545		A0A1W2PPE3	182 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	NDUFB7	P17568	137 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	G6PC	P35575	357 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	GPR12	P47775	334 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	CATR1	Q13166	79 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	RPL39P5	Q59GN2	51 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	NCR3LG1	Q68D85	454 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	LYPD2	Q6UXB3	125 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	ZNF66	Q6ZN08	573 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	C1orf87	Q8N0U7	546 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	TMEM252	Q8N6L7	170 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	SPTBN1	Q01082	2364 aa	Known RBP	13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	PIGBOS1	A0A0B4J2F0	54 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	FBXO24	O75426	580 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	JTB	O76095	146 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	KRAS	P01116	189 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545		P0C879	139 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	PVALB	P20472	110 aa	Predicted RBP	13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	DUT	P33316	252 aa	Known RBP	13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	ERVFRD-1	P60508	538 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	ZNF672	Q499Z4	452 aa	Predicted RBP	13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	UBAC2	Q8NBM4	344 aa		13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.34	□□□□□ -0.27
CLDND1-222	ENST00000510545	NKX6-3	A6NJ46	265 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	VAMP2	P63027	116 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	CT45A1	Q5HYN5	189 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	MUC15	Q8N387	334 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	OR1S2	Q8NGQ3	325 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	CT45A3	Q8NHU0	189 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	CORO2A	Q92828	525 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	HSD17B10	Q99714	261 aa	Known RBP	13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	ARV1	Q9H2C2	271 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	LINC00574	Q9H8X3	128 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	C19orf12	Q9NSK7	152 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	MMP24	Q9Y5R2	645 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	WRB	O00258	174 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	FGF2	P09038	288 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	UQCRFS1	P47985	274 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	EIF5A	P63241	154 aa	Known RBP	13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	ZNF273	Q14593	569 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	SMUG1	Q53HV7	270 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	RNF141	Q8WVD5	230 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	TMEM204	Q9BSN7	226 aa		13.33	□□□□□ -0.28
CLDND1-222	ENST00000510545	IGHV1-69-2	A0A0G2JMI3	117 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545		H3BP45	60 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	CST7	O76096	145 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	MMP9	P14780	707 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	NFYB	P25208	207 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	PRAMEF5	Q5TYX0	476 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	LRRC46	Q96FV0	321 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	ABHD14A	Q9BUJ0	271 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	CTSZ	Q9UBR2	303 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	CFAP46	Q8IYW2	2715 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	YLPM1	P49750	1951 aa	Known RBP	13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	HCFC1	P51610	2035 aa		13.32	□□□□□ -0.28
CLDND1-222	ENST00000510545	ZNF729	A6NN14	1252 aa	Predicted RBP	13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545		A8MXK9	166 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545	LYNX1	G3V0Z9	82 aa		13.31	□□□□□ -0.28
CLDND1-222	ENST00000510545		M0R1X1	148 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms