RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 Q6ZS49 121 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 SLC35E3Q7Z769 313 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 ANKRD13BQ86YJ7 626 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 C1QL4Q86Z23 238 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 SAMD12Q8N8I0 201 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 OR2D2Q9H210 308 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 FBXL15Q9H469 300 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 LIN7CQ9NUP9 197 aaKnown RBP10.68□□□□□ -0.7
SNF8-206ENST00000509989 PIPOXQ9P0Z9 390 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 FBXO7Q9Y3I1 522 aa10.68□□□□□ -0.7
SNF8-206ENST00000509989 M0R1X1 148 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 GABARAPO95166 117 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 IGKV1-16P04430 117 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 DTYMKP23919 212 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 SCAND1P57086 179 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 GNG2P59768 71 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 NDPQ00604 133 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 KIR2DS1Q14954 304 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 OR5AN1Q8NGI8 311 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 OR10J5Q8NHC4 309 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 EDARADDQ8WWZ3 215 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 SNAPC3Q92966 411 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 GPHA2Q96T91 129 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 MRPS26Q9BYN8 205 aaKnown RBP10.67□□□□□ -0.7
SNF8-206ENST00000509989 TPSG1Q9NRR2 321 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 COMMD3Q9UBI1 195 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 GAB2Q9UQC2 676 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 TNCP24821 2201 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 NOTCH3Q9UM47 2321 aa10.67□□□□□ -0.7
SNF8-206ENST00000509989 PSMB11A5LHX3 300 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 LINC00473A8K010 186 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 G3V318 75 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 IGLV2-14P01704 120 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 RANBP1P43487 201 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 SPCS2Q15005 226 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 SRSF7Q16629 238 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNF8-206ENST00000509989 PNLIPRP3Q17RR3 467 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 C2orf68Q2NKX9 166 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 FAM71F2Q6NXP2 309 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 STPG2Q8N412 459 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 RASL11BQ9BPW5 248 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 MMP27Q9H306 513 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 ANXA10Q9UJ72 324 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 ZNF221Q9UK13 617 aa10.66□□□□□ -0.7
SNF8-206ENST00000509989 IGHV7-81A0A0B4J1V7 117 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 TCRBV4S1A1TA0A5B7 111 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 H7C2Y5 167 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 NBR2O15453 112 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 KCNAB3O43448 404 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 HPGDSO60760 199 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 NDUFA3O95167 84 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 HLA-DQB1P01920 261 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 ELK1P19419 428 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 TAS2R20P59543 309 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 CFHR3Q02985 330 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 UBE2NLQ5JXB2 153 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 NDUFA11Q86Y39 141 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 NPBQ8NG41 125 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 R3HDM4Q96D70 268 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 CLCC1Q96S66 551 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 GINS4Q9BRT9 223 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 DCSTAMPQ9H295 470 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 WSB1Q9Y6I7 421 aa10.65□□□□□ -0.7
SNF8-206ENST00000509989 ATP6V0E1O15342 81 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 XRCC3O43542 346 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 IGLV2-23P01705 113 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
SNF8-206ENST00000509989 SOX6P35712 828 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 RPL30P62888 115 aaKnown RBP10.64□□□□□ -0.71
SNF8-206ENST00000509989 SSBP2P81877 361 aaPredicted RBP10.64□□□□□ -0.71
SNF8-206ENST00000509989 PSG5Q15238 335 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 KHDC1LQ5JSQ8 128 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 CNIH2Q6PI25 160 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 HOGA1Q86XE5 327 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 BVESQ8NE79 360 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 BEST4Q8NFU0 473 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 CASTOR1Q8WTX7 329 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 PHF21AQ96BD5 680 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 DUX3Q96PT4 197 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 DIABLOQ9NR28 239 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 WASHC3Q9Y3C0 194 aa10.64□□□□□ -0.71
SNF8-206ENST00000509989 OR5H14A6NHG9 310 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 SRRM4A7MD48 611 aaKnown RBP10.63□□□□□ -0.71
SNF8-206ENST00000509989 G3V4G9 280 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 RRHO14718 337 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 TUSC2O75896 110 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 SCGNO76038 276 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 EGR2P11161 476 aaPredicted RBP10.63□□□□□ -0.71
SNF8-206ENST00000509989 AADACP22760 399 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 BRWD1-AS2P59051 145 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 PJVKQ0ZLH3 352 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 ARL6IP1Q15041 203 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 MRGPRG-AS1Q2M3A8 158 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 ETV3LQ6ZN32 361 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 GPR141Q7Z602 305 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 CLVS1Q8IUQ0 354 aaPredicted RBP10.63□□□□□ -0.71
SNF8-206ENST00000509989 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 OR8H1Q8NGG4 311 aa10.63□□□□□ -0.71
SNF8-206ENST00000509989 DDB2Q92466 427 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms