RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CD1AP06126 327 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 CRYGBP07316 175 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 SCTP09683 121 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 TMEM50BP56557 158 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 KLF5Q13887 457 aaPredicted RBP12.13□□□□□ -0.47
RAB40C-202ENST00000509637 HAGHQ16775 308 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 ZNF555Q8NEP9 628 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 C5orf30Q96GV9 206 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 OR4C12Q96R67 309 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 PIPOXQ9P0Z9 390 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 PSORS1C1Q9UIG5 152 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 WASHC3Q9Y3C0 194 aa12.13□□□□□ -0.47
RAB40C-202ENST00000509637 ANKRD34BA5PLL1 514 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 EFCAB10A6NFE3 127 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 OR5H14A6NHG9 310 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 HSPA12AO43301 675 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 RGS11O94810 467 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 TRGV3P03979 118 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 VEGFCP49767 419 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 ACSM3Q53FZ2 586 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 TCTEX1D1Q8N7M0 179 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 NANOGP1Q8N7R0 232 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 FLYWCH2Q96CP2 140 aaKnown RBP12.12□□□□□ -0.47
RAB40C-202ENST00000509637 NEDD4LQ96PU5 975 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 LPAR5Q9H1C0 372 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 RETNQ9HD89 108 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 AK3Q9UIJ7 227 aa12.12□□□□□ -0.47
RAB40C-202ENST00000509637 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 H7C2Y5 167 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 GSTP1P09211 210 aaKnown RBP12.11□□□□□ -0.47
RAB40C-202ENST00000509637 CEACAM6P40199 344 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
RAB40C-202ENST00000509637 PLA2G7Q13093 441 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 FXYD3Q14802 87 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 PLGLAQ15195 96 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 NKAIN3Q8N8D7 197 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 FBLIM1Q8WUP2 373 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 GHITMQ9H3K2 345 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 PALMDQ9NP74 551 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 FKBP14Q9NWM8 211 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 GHRLQ9UBU3 117 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 ERGIC3Q9Y282 383 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 LRRC42Q9Y546 428 aa12.11□□□□□ -0.47
RAB40C-202ENST00000509637 TRBV6-6A0A0A6YYG2 114 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
RAB40C-202ENST00000509637 SLC22A1O15245 554 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 SLC25A17O43808 307 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 CSN3P07498 182 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 CD3GP09693 182 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 MC5RP33032 325 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 WNT4P56705 351 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 TMEM267Q0VDI3 215 aaPredicted RBP12.1□□□□□ -0.47
RAB40C-202ENST00000509637 LINC00322Q6ZN03 302 aaPredicted RBP12.1□□□□□ -0.47
RAB40C-202ENST00000509637 AHSA2Q719I0 299 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 FAM89BQ8N5H3 189 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 SETD6Q8TBK2 473 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 PTX4Q96A99 478 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 RSRP1Q9BUV0 290 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 TMEM59Q9BXS4 323 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 Q9N2K0 584 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 STEAP1Q9UHE8 339 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 STUB1Q9UNE7 303 aa12.1□□□□□ -0.47
RAB40C-202ENST00000509637 PLECQ15149 4684 aaKnown RBP12.1□□□□□ -0.47
RAB40C-202ENST00000509637 ARSBP15848 533 aa12.09□□□□□ -0.47
RAB40C-202ENST00000509637 SYNJ2BPP57105 145 aa12.09□□□□□ -0.47
RAB40C-202ENST00000509637 TAS2R43P59537 309 aa12.09□□□□□ -0.47
RAB40C-202ENST00000509637 RPS16P62249 146 aaKnown RBP12.09□□□□□ -0.47
RAB40C-202ENST00000509637 DYRK1AQ13627 763 aa12.09□□□□□ -0.47
RAB40C-202ENST00000509637 PYHIN1Q6K0P9 492 aa12.09□□□□□ -0.47
RAB40C-202ENST00000509637 RNF5Q99942 180 aa12.09□□□□□ -0.47
RAB40C-202ENST00000509637 CHCHD3Q9NX63 227 aaKnown RBP12.09□□□□□ -0.47
RAB40C-202ENST00000509637 ABRACLQ9P1F3 81 aa12.09□□□□□ -0.47
RAB40C-202ENST00000509637 RBBP9O75884 186 aa12.08□□□□□ -0.48
RAB40C-202ENST00000509637 TFAP2AP05549 437 aa12.08□□□□□ -0.48
RAB40C-202ENST00000509637 EDN2P20800 178 aa12.08□□□□□ -0.48
RAB40C-202ENST00000509637 HLA-DRB3P79483 266 aa12.08□□□□□ -0.48
RAB40C-202ENST00000509637 POC5Q8NA72 575 aa12.08□□□□□ -0.48
RAB40C-202ENST00000509637 SLA2Q9H6Q3 261 aa12.08□□□□□ -0.48
RAB40C-202ENST00000509637 RANGRFQ9HD47 186 aaPredicted RBP12.08□□□□□ -0.48
RAB40C-202ENST00000509637 PLCXD1Q9NUJ7 323 aa12.08□□□□□ -0.48
RAB40C-202ENST00000509637 LSM2Q9Y333 95 aaKnown RBP12.08□□□□□ -0.48
RAB40C-202ENST00000509637 UBBP0CG47 229 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 APELAP0DMC3 54 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 CPEP16870 476 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 P2RY14Q15391 338 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 PLAC9Q5JTB6 97 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 TTC23Q5W5X9 447 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 TMEM91Q6ZNR0 172 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 ANKRD13BQ86YJ7 626 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 DHRSXQ8N5I4 330 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 BPIFB6Q8NFQ5 453 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 OR9G4Q8NGQ1 327 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 KCNG3Q8TAE7 436 aa12.07□□□□□ -0.48
RAB40C-202ENST00000509637 ISOC1Q96CN7 298 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms