RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 SPARTQ8N0X7 666 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 MINDY2Q8NBR6 621 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 EDARADDQ8WWZ3 215 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 RAB3CQ96E17 227 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 FBXL15Q9H469 300 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 FBXO7Q9Y3I1 522 aa13.98□□□□□ -0.17
TPM3-220ENST00000509601 A0A0B4J203 849 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 OR5H14A6NHG9 310 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 RRHO14718 337 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 CD3GP09693 182 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 EGR2P11161 476 aaPredicted RBP13.97□□□□□ -0.17
TPM3-220ENST00000509601 RAB3BP20337 219 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 GALP22466 123 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 CX3CL1P78423 397 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 NDPQ00604 133 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 C19orf54Q5BKX5 351 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 C22orf42Q6IC83 251 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 ZNF383Q8NA42 475 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 DRAXINQ8NBI3 349 aaPredicted RBP13.97□□□□□ -0.17
TPM3-220ENST00000509601 OR10R2Q8NGX6 335 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 OR8U1Q8NH10 309 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 RNF5Q99942 180 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 GPR61Q9BZJ8 451 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 PARP11Q9NR21 331 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 RDH8Q9NYR8 311 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 KIAA1456Q9P272 454 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 NUBP2Q9Y5Y2 271 aa13.97□□□□□ -0.17
TPM3-220ENST00000509601 TRAV41A0A0B4J266 112 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 GSTT2P0CG29 244 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 GSTT2BP0CG30 244 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 GNB3P16520 340 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 RAB6AP20340 208 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 RAB9AP51151 201 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 FHL3Q13643 280 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 IGSF11Q5DX21 431 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 ZNF660Q6AZW8 331 aaPredicted RBP13.96□□□□□ -0.17
TPM3-220ENST00000509601 OR4A4PQ8NGN8 299 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 UBE2E2Q96LR5 201 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 GNB4Q9HAV0 340 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 WASHC3Q9Y3C0 194 aa13.96□□□□□ -0.17
TPM3-220ENST00000509601 H7C2Y5 167 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 I3L521 148 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 MFNGO00587 321 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 FABP7O15540 132 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 SOX15O60248 233 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 RBBP9O75884 186 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 GSTP1P09211 210 aaKnown RBP13.95□□□□□ -0.18
TPM3-220ENST00000509601 MYL9P24844 172 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 CRIP2P52943 208 aaPredicted RBP13.95□□□□□ -0.18
TPM3-220ENST00000509601 PSG5Q15238 335 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 DEFB121Q5J5C9 76 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 OR11H1Q8NG94 326 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 YTHDF1Q9BYJ9 559 aaKnown RBP13.95□□□□□ -0.18
TPM3-220ENST00000509601 ZNF230Q9UIE0 474 aaPredicted RBP13.95□□□□□ -0.18
TPM3-220ENST00000509601 GAB2Q9UQC2 676 aa13.95□□□□□ -0.18
TPM3-220ENST00000509601 TRBV6-7A0A0A0MS04 114 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 IGKV1-16P04430 117 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 FCGR3AP08637 254 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 HIST1H1DP16402 221 aaKnown RBP13.94□□□□□ -0.18
TPM3-220ENST00000509601 FGF9P31371 208 aaPredicted RBP13.94□□□□□ -0.18
TPM3-220ENST00000509601 RAB25P57735 213 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 RUNX1Q01196 453 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 TMEM65Q6PI78 240 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 MAFIPQ8WZ33 124 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 DPF1Q92782 380 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 CABLES2Q9BTV7 478 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 TXNL4BQ9NX01 149 aaKnown RBP13.94□□□□□ -0.18
TPM3-220ENST00000509601 SCOCQ9UIL1 159 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 ZNF221Q9UK13 617 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 ELF5Q9UKW6 265 aaPredicted RBP13.94□□□□□ -0.18
TPM3-220ENST00000509601 COL7A1Q02388 2944 aa13.94□□□□□ -0.18
TPM3-220ENST00000509601 A0A075B6Q4 140 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 SMIM30A4D0T7 59 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 SERPINB10P48595 397 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 ASPHD1Q5U4P2 390 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 OR5M8Q8NGP6 311 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 OR1N2Q8NGR9 330 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 C5orf30Q96GV9 206 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 CLCC1Q96S66 551 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 VSIG4Q9Y279 399 aa13.93□□□□□ -0.18
TPM3-220ENST00000509601 IGKV1D-8A0A087WSZ0 117 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 METTL21EPA6NDL7 271 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 BET1O15155 118 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 TFAP2AP05549 437 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 OR8U9P0C7N5 309 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 GADD45AP24522 165 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 PSMB9P28065 219 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
TPM3-220ENST00000509601 MRPS15P82914 257 aaKnown RBP13.92□□□□□ -0.18
TPM3-220ENST00000509601 SRSF7Q16629 238 aaKnown RBP eCLIP13.92□□□□□ -0.183e-11■■■■□ 20.4
TPM3-220ENST00000509601 ECSCRQ19T08 205 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 Q6ZS49 121 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.92□□□□□ -0.18
TPM3-220ENST00000509601 OR5B12Q96R08 314 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 SDHAF2Q9NX18 166 aa13.92□□□□□ -0.18
TPM3-220ENST00000509601 METTL1Q9UBP6 276 aaKnown RBP13.92□□□□□ -0.18
TPM3-220ENST00000509601 NOTOA8MTQ0 251 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms