RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CD37P11049 281 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 CPEP16870 476 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 CD40LGP29965 261 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 RPS16P62249 146 aaKnown RBP11.93□□□□□ -0.5
TPM3-219ENST00000509409 HLA-DRB3P79483 266 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 NDPQ00604 133 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 TCTEX1D1Q8N7M0 179 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 DRAXINQ8NBI3 349 aaPredicted RBP11.93□□□□□ -0.5
TPM3-219ENST00000509409 DLX4Q92988 240 aaPredicted RBP11.93□□□□□ -0.5
TPM3-219ENST00000509409 MS4A10Q96PG2 267 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 RNF5Q99942 180 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 CMSS1Q9BQ75 279 aaKnown RBP11.93□□□□□ -0.5
TPM3-219ENST00000509409 CCDC90BQ9GZT6 254 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 METTL1Q9UBP6 276 aaKnown RBP11.93□□□□□ -0.5
TPM3-219ENST00000509409 FBXO7Q9Y3I1 522 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 NUBP2Q9Y5Y2 271 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 KMT2CQ8NEZ4 4911 aaKnown RBP11.93□□□□□ -0.5
TPM3-219ENST00000509409 NBEAL2Q6ZNJ1 2754 aa11.93□□□□□ -0.5
TPM3-219ENST00000509409 ARL6IP5O75915 188 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 RANBP1P43487 201 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 SLURP1P55000 103 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 RPS25P62851 125 aaKnown RBP11.92□□□□□ -0.5
TPM3-219ENST00000509409 IRF3Q14653 427 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 TRAM1Q15629 374 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 ACTBL2Q562R1 376 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 TMEM91Q6ZNR0 172 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 FAM89BQ8N5H3 189 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 OR5AN1Q8NGI8 311 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 ARHGAP5-AS1Q96IT6 56 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 AGMATQ9BSE5 352 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 FAM103A1Q9BTL3 118 aaKnown RBP11.92□□□□□ -0.5
TPM3-219ENST00000509409 PECRQ9BY49 303 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 TOLLIPQ9H0E2 274 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 Q9N2K0 584 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 ISYNA1Q9NPH2 558 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 HSF4Q9ULV5 492 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 SMAD5-AS1Q9Y6J3 95 aa11.92□□□□□ -0.5
TPM3-219ENST00000509409 RGS10O43665 173 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 SOX15O60248 233 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 IGHV3-11P01762 117 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 LGALS1P09382 135 aaKnown RBP11.91□□□□□ -0.5
TPM3-219ENST00000509409 EGR2P11161 476 aaPredicted RBP11.91□□□□□ -0.5
TPM3-219ENST00000509409 CALRP27797 417 aaKnown RBP11.91□□□□□ -0.5
TPM3-219ENST00000509409 CRIP2P52943 208 aaPredicted RBP11.91□□□□□ -0.5
TPM3-219ENST00000509409 TMEM50BP56557 158 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 CLDN12P56749 244 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 MRPS15P82914 257 aaKnown RBP11.91□□□□□ -0.5
TPM3-219ENST00000509409 TPBGQ13641 420 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 PSG5Q15238 335 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 C2orf76Q3KRA6 126 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 PYHIN1Q6K0P9 492 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 LFNGQ8NES3 379 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 OR56B1Q8NGI3 324 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 TSNAXQ99598 290 aaKnown RBP11.91□□□□□ -0.5
TPM3-219ENST00000509409 GFI1Q99684 422 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 C12orf4Q9NQ89 552 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 ZNF355PQ9NSJ1 428 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
TPM3-219ENST00000509409 GAB2Q9UQC2 676 aa11.91□□□□□ -0.5
TPM3-219ENST00000509409 IGHV4OR15-8A0A075B7B6 117 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 A0A087WW49 117 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 TRDCB7Z8K6 153 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 CA2P00918 260 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 APOA2P02652 100 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 HSPB1P04792 205 aaKnown RBP11.9□□□□□ -0.5
TPM3-219ENST00000509409 TFAP2AP05549 437 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 PSMA1P25786 263 aaKnown RBP11.9□□□□□ -0.5
TPM3-219ENST00000509409 AQP4P55087 323 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 TPPP2P59282 170 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 AKIRIN2Q53H80 203 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 CD200R1LQ6Q8B3 271 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 ZNF562Q6V9R5 426 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 FAM3DQ96BQ1 224 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 FLYWCH2Q96CP2 140 aaKnown RBP11.9□□□□□ -0.5
TPM3-219ENST00000509409 V9GY05 133 aa11.9□□□□□ -0.5
TPM3-219ENST00000509409 TENM3Q9P273 2699 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 M0R1X1 148 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 DENRO43583 198 aaKnown RBP11.89□□□□□ -0.51
TPM3-219ENST00000509409 CNIH1O95406 144 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 CD3GP09693 182 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 SPNP16150 400 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 PSMD7P51665 324 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 LINC00205P59089 165 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 OR6Q1Q8NGQ2 317 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 GRPEL2Q8TAA5 225 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 ARPC1AQ92747 370 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 PTX4Q96A99 478 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 OR4C12Q96R67 309 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 DUSP21Q9H596 190 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 RDH8Q9NYR8 311 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 RAB22AQ9UL26 194 aa11.89□□□□□ -0.51
TPM3-219ENST00000509409 FOXI3A8MTJ6 420 aaPredicted RBP11.88□□□□□ -0.51
TPM3-219ENST00000509409 BET1O15155 118 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 PROP1O75360 226 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 TRGV3P03979 118 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 IGKV1-16P04430 117 aa11.88□□□□□ -0.51
TPM3-219ENST00000509409 SNRPBP14678 240 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms