RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 DRAM1Q8N682 238 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 C3orf56Q8N813 242 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 ZNF439Q8NDP4 499 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 OR52M1Q8NGK5 317 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 OR56B4Q8NH76 319 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 CAPSLQ8WWF8 208 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 LINC00476Q8WZB0 136 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 PTX4Q96A99 478 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 SLC25A38Q96DW6 304 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 RIMS4Q9H426 269 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-205ENST00000506924 RAB9BQ9NP90 201 aa7.58□□□□□ -1.2
CLCN3-205ENST00000506924 TRAV18A0A075B6X5 111 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 TRBV6-6A0A0A6YYG2 114 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 IGKV1-6A0A0C4DH72 117 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 A0A1W2PPI3 338 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 TMEM235A6NFC5 223 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 SH2D7A6NKC9 451 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-205ENST00000506924 TRDCB7Z8K6 153 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 HSD17B6O14756 317 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 FCER2P06734 321 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 SNRNP70P08621 437 aaKnown RBP7.57□□□□□ -1.2
CLCN3-205ENST00000506924 FCGR3AP08637 254 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 GSTT2P0CG29 244 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 GSTT2BP0CG30 244 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 PTHLHP12272 177 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 BRS3P32247 399 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 TALDO1P37837 337 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 MNDAP41218 407 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 OR3A3P47888 321 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 COMPP49747 757 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-205ENST00000506924 HTD2P86397 168 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 HES1Q14469 280 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 HNF4GQ14541 408 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 CTF1Q16619 201 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 IGSF11Q5DX21 431 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 HIST2H2BDQ6DRA6 164 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 SLC25A48Q6ZT89 311 aaKnown RBP7.57□□□□□ -1.2
CLCN3-205ENST00000506924 MOB1BQ7L9L4 216 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 ANKRD13BQ86YJ7 626 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 OR4F5Q8NH21 305 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 LINC01006Q8NI28 216 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 NUDCD2Q8WVJ2 157 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 CREB3L1Q96BA8 519 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 PHF21AQ96BD5 680 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 ABHD14AQ9BUJ0 271 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 ST6GALNAC5Q9BVH7 336 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 BEX1Q9HBH7 125 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 JPT1Q9UK76 154 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 SPATA2Q9UM82 520 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 DNHD1Q96M86 4753 aa7.57□□□□□ -1.2
CLCN3-205ENST00000506924 TENM1Q9UKZ4 2725 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 STAB1Q9NY15 2570 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 IGKV1D-8A0A087WSZ0 117 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 IGHV1-3A0A0C4DH29 117 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 SERPINE3A8MV23 424 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 ZNF736B4DX44 427 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-205ENST00000506924 F5H697 171 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 BET1O15155 118 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 HSPA12AO43301 675 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 YPEL1O60688 119 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 GABARAPO95166 117 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 NDUFA7O95182 113 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 GAPDHP04406 335 aaKnown RBP7.56□□□□□ -1.2
CLCN3-205ENST00000506924 CEACAM6P40199 344 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 DYNLT3P51808 116 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 ARHGDIBP52566 201 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 BLCAPP62952 87 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 HERPUD1Q15011 391 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 ZNF260Q3ZCT1 412 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 CCDC144NLQ6NUI1 221 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 ZNF554Q86TJ5 538 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 CLVS1Q8IUQ0 354 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-205ENST00000506924 LINC00311Q8N616 119 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 SAMD12Q8N8I0 201 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 OR2AK2Q8NG84 335 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 RTN4IP1Q8WWV3 396 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-205ENST00000506924 SLC25A46Q96AG3 418 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 YPEL2Q96QA6 119 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 DCSTAMPQ9H295 470 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 COMMD3Q9UBI1 195 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 PITPNC1Q9UKF7 332 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 RNF150Q9ULK6 438 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 ETV7Q9Y603 341 aa7.56□□□□□ -1.2
CLCN3-205ENST00000506924 CLPSL1A2RUU4 121 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 MEIS3P1A6NDR6 274 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 OOSP1A8MZH6 123 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 J3QRK9 145 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 FABP7O15540 132 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 SSX5O60225 188 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 RGS11O94810 467 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 IGKV1D-33P01593 117 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 IGKV1-33P01594 117 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 ZBTB25P24278 435 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 IL3RAP26951 378 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 RAB7AP51149 207 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 GNG2P59768 71 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 KRTAP10-3P60369 221 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 SPCS2Q15005 226 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 TMEM30BQ3MIR4 351 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 RPL39P5Q59GN2 51 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms