RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 IGLV1-40P01703 118 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 OR5H8P0DN80 308 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 RAB6AP20340 208 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 VDAC1P21796 283 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 ZBTB25P24278 435 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 CRIP2P52943 208 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 PRR20EP86478 221 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 PRR20CP86479 221 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 PRR20DP86480 221 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 PRR20BP86481 221 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 PRR20AP86496 221 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 KIAA0141Q14154 515 aaPredicted RBP7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 KIR2DS1Q14954 304 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 MOGAT2Q3SYC2 334 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 C19orf54Q5BKX5 351 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 FAM131AQ6UXB0 335 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 LCNL1Q6ZST4 164 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 SPARTQ8N0X7 666 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 EDARADDQ8WWZ3 215 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 ABHD14BQ96IU4 210 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 CMSS1Q9BQ75 279 aaKnown RBP7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 GPR61Q9BZJ8 451 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 OR51J1Q9H342 316 aa7.09□□□□□ -1.27
PDLIM5-209ENST00000506632 TRDCB7Z8K6 153 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 K7EIL1 84 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 CCL24O00175 119 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 RRHO14718 337 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 ATP6V0E1O15342 81 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 RBBP9O75884 186 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 DIRAS3O95661 229 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 FCGR3AP08637 254 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 RAB3BP20337 219 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 MYL9P24844 172 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 FGF9P31371 208 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 MC5RP33032 325 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 CEACAM6P40199 344 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 NDPQ00604 133 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 FHL3Q13643 280 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 C22orf42Q6IC83 251 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 LIN54Q6MZP7 749 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 GLDNQ6ZMI3 551 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 MINDY2Q8NBR6 621 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 OR4A4PQ8NGN8 299 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 OR10R2Q8NGX6 335 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 OR8U1Q8NH10 309 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 C4orf3Q8WVX3 66 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 RAB3CQ96E17 227 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 DUX3Q96PT4 197 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 RNF5Q99942 180 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 CABLES2Q9BTV7 478 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 MCRIP2Q9BUT9 160 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 YTHDF1Q9BYJ9 559 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 RDH8Q9NYR8 311 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 WASHC3Q9Y3C0 194 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 FBXO7Q9Y3I1 522 aa7.08□□□□□ -1.28
PDLIM5-209ENST00000506632 A0A0B4J203 849 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 WI2-2373I1.2A0A1W2PRP0 233 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 G3V318 75 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 FABP7O15540 132 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 HSPA12AO43301 675 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 GSTP1P09211 210 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 CD3GP09693 182 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 HIST1H1DP16402 221 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 HOXD3P31249 432 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 SERPINB10P48595 397 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 CX3CL1P78423 397 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 RUNX1Q01196 453 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 SRSF7Q16629 238 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 DEFB136Q30KP8 78 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF660Q6AZW8 331 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 Q6ZS49 121 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF383Q8NA42 475 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 FCGR1BQ92637 280 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 UBE2E2Q96LR5 201 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 KLK15Q9H2R5 256 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 FBXL15Q9H469 300 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 PARP11Q9NR21 331 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 TXNL4BQ9NX01 149 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 KIAA1456Q9P272 454 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 WSB1Q9Y6I7 421 aa7.07□□□□□ -1.28
PDLIM5-209ENST00000506632 TRBV6-7A0A0A0MS04 114 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 TRAV41A0A0B4J266 112 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 NOTOA8MTQ0 251 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 I3L521 148 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 FCN1O00602 326 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 SOX15O60248 233 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 IGKV1-16P04430 117 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 TFAP2AP05549 437 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 GSTT2P0CG29 244 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 GSTT2BP0CG30 244 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 EGR2P11161 476 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 GNB3P16520 340 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 GADD45AP24522 165 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 PSMB9P28065 219 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 LINC00205P59089 165 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 IGSF11Q5DX21 431 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 ASPHD1Q5U4P2 390 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms