RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 LRP11Q86VZ4 500 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 LILRA3Q8N6C8 439 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF615Q8N8J6 731 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 OR10D3Q8NH80 312 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 VSTM2AQ8TAG5 236 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 OR5P3Q8WZ94 311 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 NEUROG1Q92886 237 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 RPEQ96AT9 228 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 RASL10BQ96S79 203 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 RTBDNQ9BSG5 229 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-203ENST00000502998 SPANXDQ9BXN6 97 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 RERGLQ9H628 205 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 SH2D2AQ9NP31 389 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 BPIFA1Q9NP55 256 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 RPRMQ9NS64 109 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 BEX4Q9NWD9 120 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-203ENST00000502998 KIAA1456Q9P272 454 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 DUSP13Q9UII6 198 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 B9D1Q9UPM9 204 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 LSM5Q9Y4Y9 91 aaKnown RBP5.56□□□□□ -1.52
CLCN3-203ENST00000502998 SPTA1P02549 2419 aa5.56□□□□□ -1.52
CLCN3-203ENST00000502998 NUP210Q8TEM1 1887 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-203ENST00000502998 SCN1AP35498 2009 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 CCDC88CQ9P219 2028 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 TRAV1-2A0A0B4J238 106 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 DUXBA0A1W2PPF3 345 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 MYBPHLA2RUH7 354 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 RBFOX3A6NFN3 312 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 OR4C45A6NMZ5 311 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF850A8MQ14 1090 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 H0YJW9 148 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 K7EN84 100 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 TMPRSS2O15393 492 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF253O75346 499 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 DHRS3O75911 302 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 KBTBD11O94819 623 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 EML2O95834 649 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 IFNW1P05000 195 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 HPNP05981 417 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 TACR1P25103 407 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 PRDX2P32119 198 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 G6PCP35575 357 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 PGGT1BP53609 377 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 EMP1P54849 157 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 MTPNP58546 118 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 YBX1P67809 324 aaKnown RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 PSG7Q13046 419 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 MSMO1Q15800 293 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 PTPRNQ16849 979 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF506Q5JVG8 444 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 C12orf73Q69YU5 71 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 SPSB3Q6PJ21 355 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 DHRS13Q6UX07 377 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 ADAMTSL5Q6ZMM2 481 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 CBLL1Q75N03 491 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF534Q76KX8 674 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 RNF44Q7L0R7 432 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM150AQ86TG1 271 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 LINC00471Q8N535 108 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 METTL27Q8N6F8 245 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 OR2M3Q8NG83 312 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 OR51A4Q8NGJ6 313 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 ATP6V0E2Q8NHE4 81 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 C2orf15Q8WU43 125 aaKnown RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 AQP3Q92482 292 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 MSI2Q96DH6 328 aaKnown RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 OR4C12Q96R67 309 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 RHOJQ9H4E5 214 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 PNRC2Q9NPJ4 139 aaKnown RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 PRTFDC1Q9NRG1 225 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 CISHQ9NSE2 258 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 MBNL3Q9NUK0 354 aaKnown RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 OR5V1Q9UGF6 321 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 MED31Q9Y3C7 131 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 FIS1Q9Y3D6 152 aa5.55□□□□□ -1.52
CLCN3-203ENST00000502998 ASCC3Q8N3C0 2202 aaKnown RBP5.55□□□□□ -1.52
CLCN3-203ENST00000502998 TRAV9-2A0A087WT02 112 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM89A2RUT3 159 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 FAM231BA6NCW3 169 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 MBD3L4A6NDZ8 208 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 MBD3L3A6NE82 208 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 OR4C46A6NHA9 309 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 OTOL1A6NHN0 477 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 MBD3L5A6NJ08 208 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 HCRTO43612 131 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 TTRP02766 147 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 KLK1P06870 262 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 NHLRC4P0CG21 123 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 PTHLHP12272 177 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 ATP1B2P14415 290 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 HMGA1P17096 107 aaKnown RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 SRD5A1P18405 259 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 OPRM1P35372 400 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 OR1E2P47887 323 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 STC1P52823 247 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 UFM1P61960 85 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 CATR1Q13166 79 aa5.54□□□□□ -1.52
CLCN3-203ENST00000502998 ATXN7L3Q14CW9 347 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-203ENST00000502998 LPAL2Q16609 132 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms