RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NEIL3Q8TAT5 605 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 RPS4Y2Q8TD47 263 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CAPSLQ8WWF8 208 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 RASSF5Q8WWW0 418 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ST8SIA1Q92185 356 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 PIGCQ92535 297 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SLC35B4Q969S0 331 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 STARD4Q96DR4 205 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ZHX1-C8orf76Q96EF9 292 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SLC38A2Q96QD8 506 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 MYCBPQ99417 103 aaPredicted RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 CNN2Q99439 309 aaKnown RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 PELOQ9BRX2 385 aaKnown RBP1.8□□□□□ -2.12
RIF1-212ENST00000498041 OR2H1Q9GZK4 316 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 MAGT1Q9H0U3 335 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 BATF3Q9NR55 127 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 SDHAF3Q9NRP4 125 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 TMEM38BQ9NVV0 291 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 NDUFB11Q9NX14 153 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 EXTL2Q9UBQ6 330 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CYB5R1Q9UHQ9 305 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 LAMP5Q9UJQ1 280 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 ERGIC3Q9Y282 383 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 HSPE1-MOB4S4R3N1 261 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 NAV3Q8IVL0 2385 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 DMXL1Q9Y485 3027 aa1.8□□□□□ -2.12
RIF1-212ENST00000498041 CACNA1DQ01668 2161 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 PCNX1Q96RV3 2341 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 RYR3Q15413 4870 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 MUC2Q02817 5179 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 DMDP11532 3685 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 PPIAL4CA0A0B4J2A2 164 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 IGHV1-18A0A0C4DH31 117 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 LOC107986453A0A1B0GWG9 222 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 A0A1W2PPE3 182 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 F5H5P2 479 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 TEX46H3BTG2 121 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 YKT6O15498 198 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 RGS5O15539 181 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ZNF208O43345 1280 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ORC5O43913 435 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 CRTAPO75718 401 aaPredicted RBP1.79□□□□□ -2.12
RIF1-212ENST00000498041 IGLV3-1P01715 115 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 PMP2P02689 132 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 IGF1P05019 195 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ALDOBP05062 364 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 IFI6P09912 130 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 H2BFMP0C1H6 154 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 PPIAL4GP0DN37 164 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 IL7P13232 177 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 RPA2P15927 270 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ZNF823P16415 610 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ZNF3P17036 446 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ZNF43P17038 809 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 CXCL3P19876 107 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 CRYGSP22914 178 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 CDK2P24941 298 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 HLA-DMAP28067 261 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 AGTR1P30556 359 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 OPRM1P35372 400 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 CTRLP40313 264 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 FABP6P51161 128 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 IDH3GP51553 393 aaPredicted RBP1.79□□□□□ -2.12
RIF1-212ENST00000498041 GBX2P52951 348 aaPredicted RBP1.79□□□□□ -2.12
RIF1-212ENST00000498041 SNRPD2P62316 118 aaKnown RBP1.79□□□□□ -2.12
RIF1-212ENST00000498041 FAM3AP98173 230 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 IFITM2Q01629 132 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 TMED1Q13445 227 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 PIGYQ3MUY2 71 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ZNF404Q494X3 552 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 PYDC2Q56P42 97 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 RPL22L1Q6P5R6 122 aaKnown RBP1.79□□□□□ -2.12
RIF1-212ENST00000498041 FAM131AQ6UXB0 335 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 LYPD2Q6UXB3 125 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 Q6ZS92 163 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 RAB43Q86YS6 212 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 MTURNQ8N3F0 131 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 ZNF676Q8N7Q3 588 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 OR1M1Q8NGA1 313 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 OR11L1Q8NGX0 322 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 OR8S1Q8NH09 359 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 OR52N1Q8NH53 320 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 OR5AK2Q8NH90 309 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 OR1F12Q8NHA8 337 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 GRPEL2Q8TAA5 225 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 NANPQ8TBE9 248 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 SYNPRQ8TBG9 265 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 PLPPR1Q8TBJ4 325 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 SLC25A40Q8TBP6 338 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 HAVCR2Q8TDQ0 301 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 RNF133Q8WVZ7 376 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 TMEM234Q8WY98 164 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 UFD1Q92890 307 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 LEAP2Q969E1 77 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 IL22RA2Q969J5 263 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 YIPF5Q969M3 257 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 SLC25A46Q96AG3 418 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 DDIT4LQ96D03 193 aa1.79□□□□□ -2.12
RIF1-212ENST00000498041 SLC25A44Q96H78 314 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms