RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CD40LGP29965 261 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 CHRNA7P36544 502 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 CRIP2P52943 208 aaPredicted RBP9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 GNB1P62873 340 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 CX3CL1P78423 397 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 HLA-DRB3P79483 266 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 P2RY14Q15391 338 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 RAB11BQ15907 218 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 PYHIN1Q6K0P9 492 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 GLDNQ6ZMI3 551 aaPredicted RBP9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 ABHD14BQ96IU4 210 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 LPAR5Q9H1C0 372 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 C12orf4Q9NQ89 552 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 ZNF221Q9UK13 617 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 HSF4Q9ULV5 492 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 A3GALT2U3KPV4 340 aa9.13□□□□□ -0.95
NUDCD3-211ENST00000497978 A0A0A6YYD4 124 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 LINC01619G3V211 115 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 CPEP16870 476 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 TPBGQ13641 420 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 IRF3Q14653 427 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 ASPHD1Q5U4P2 390 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 PPP1R27Q86WC6 154 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 FAM89BQ8N5H3 189 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 OR5AN1Q8NGI8 311 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 DCUN1D4Q92564 292 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 TSNAXQ99598 290 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 CMSS1Q9BQ75 279 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 AGMATQ9BSE5 352 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 HDHD3Q9BSH5 251 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 C11orf54Q9H0W9 315 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 Q9N2K0 584 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 ISYNA1Q9NPH2 558 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 OR1A1Q9P1Q5 309 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 METTL1Q9UBP6 276 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 AK6Q9Y3D8 172 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 NUBP2Q9Y5Y2 271 aa9.12□□□□□ -0.95
NUDCD3-211ENST00000497978 NBEAL2Q6ZNJ1 2754 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 ELOA3CA0A087WX78 387 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 FCN1O00602 326 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 RGS10O43665 173 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 SAP30O75446 220 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 APOA2P02652 100 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 LGALS1P09382 135 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 SCTP09683 121 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 VEGFCP49767 419 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 PSMD7P51665 324 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 RPS16P62249 146 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 RPS25P62851 125 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 MRPS15P82914 257 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 NDPQ00604 133 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 AKIRIN2Q53H80 203 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 ACTBL2Q562R1 376 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 C19orf54Q5BKX5 351 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 CD200R1LQ6Q8B3 271 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 UNQ5815/PRO19632Q6UWF5 114 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 TMEM91Q6ZNR0 172 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 OR56B1Q8NGI3 324 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 PTX4Q96A99 478 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 FLYWCH2Q96CP2 140 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 CLCC1Q96S66 551 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 PECRQ9BY49 303 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 CCDC90BQ9GZT6 254 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 TOLLIPQ9H0E2 274 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 PARP12Q9H0J9 701 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 ALX4Q9H161 411 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 FBXO7Q9Y3I1 522 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 SMAD5-AS1Q9Y6J3 95 aa9.11□□□□□ -0.95
NUDCD3-211ENST00000497978 ERICH4A6NGS2 130 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 TRDCB7Z8K6 153 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 ARPC1BO15143 372 aaKnown RBP9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 SOX15O60248 233 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 SPDEFO95238 335 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 GHRHP01286 108 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 TFAP2AP05549 437 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 CALRP27797 417 aaKnown RBP9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 SERPINB10P48595 397 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 SLURP1P55000 103 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 AQP4P55087 323 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 MLLT11Q13015 90 aaPredicted RBP9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 PSG5Q15238 335 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 ZNF562Q6V9R5 426 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 PDPNQ86YL7 162 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 DRAXINQ8NBI3 349 aaPredicted RBP9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 OR6Q1Q8NGQ2 317 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 CASTOR1Q8WTX7 329 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 DLX4Q92988 240 aaPredicted RBP9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 ARHGAP5-AS1Q96IT6 56 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 GFI1Q99684 422 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 ASCL2Q99929 193 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 DUSP21Q9H596 190 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 SLA2Q9H6Q3 261 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 ACOT13Q9NPJ3 140 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 V9GY05 133 aa9.1□□□□□ -0.95
NUDCD3-211ENST00000497978 IGHV4OR15-8A0A075B7B6 117 aa9.09□□□□□ -0.95
NUDCD3-211ENST00000497978 A0A087WW49 117 aa9.09□□□□□ -0.95
NUDCD3-211ENST00000497978 FOXI3A8MTJ6 420 aaPredicted RBP9.09□□□□□ -0.95
NUDCD3-211ENST00000497978 ANKRD65E5RJM6 399 aa9.09□□□□□ -0.95
NUDCD3-211ENST00000497978 DENRO43583 198 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms