RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 HLA-GP17693 338 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 NFYBP25208 207 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 ZNF134P52741 427 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 FCN2Q15485 313 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 TMEM249Q2WGJ8 235 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 CT45A1Q5HYN5 189 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 C1orf122Q6ZSJ8 110 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 TBC1D26Q86UD7 250 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.6□□□□□ -0.55
VPS26A-209ENST00000497564 CT45A3Q8NHU0 189 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 PSG11Q9UQ72 335 aa11.6□□□□□ -0.55
VPS26A-209ENST00000497564 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■□□□□ 9
VPS26A-209ENST00000497564 RNF212BA8MTL3 300 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 H0Y980 276 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 SLC31A2O15432 143 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 ST8SIA5O15466 376 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 PGLYRP1O75594 196 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-209ENST00000497564 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
VPS26A-209ENST00000497564 LOXL1Q08397 574 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-209ENST00000497564 TMEM187Q14656 261 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 UTF1Q5T230 341 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 AKAP14Q86UN6 197 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 LRTM2Q8N967 370 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 OR11H7Q8NGC8 314 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 COQ8AQ8NI60 647 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 PPP1R14BQ96C90 147 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 C5orf30Q96GV9 206 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 ABHD14BQ96IU4 210 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 TMEM133Q9H2Q1 129 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 UNKLQ9H9P5 680 aaKnown RBP11.59□□□□□ -0.55
VPS26A-209ENST00000497564 SDHAF2Q9NX18 166 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 RNF150Q9ULK6 438 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 MXRA5Q9NR99 2828 aa11.59□□□□□ -0.55
VPS26A-209ENST00000497564 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 C3orf85A0A1B0GTC6 90 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 CD5LO43866 347 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 OR5AC1P0C628 307 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 USF1P22415 310 aaPredicted RBP11.58□□□□□ -0.56
VPS26A-209ENST00000497564 F2RP25116 425 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 GPR12P47775 334 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 ERVFRD-1P60508 538 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 SRPXP78539 464 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 SLC9A3R2Q15599 337 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 ANKRD55Q3KP44 614 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 ZNF66Q6ZN08 573 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 ODF3L1Q8IXM7 274 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 TCTEX1D1Q8N7M0 179 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 Q8N7P7 452 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 CASTOR1Q8WTX7 329 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 GLYATL2Q8WU03 294 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 LEAP2Q969E1 77 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 C1orf159Q96HA4 380 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 FAM212BQ9NTI7 297 aaPredicted RBP11.58□□□□□ -0.56
VPS26A-209ENST00000497564 LIN7CQ9NUP9 197 aaKnown RBP11.58□□□□□ -0.56
VPS26A-209ENST00000497564 PIPOXQ9P0Z9 390 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 KPTNQ9Y664 436 aa11.58□□□□□ -0.56
VPS26A-209ENST00000497564 FBN1P35555 2871 aaKnown RBP11.57□□□□□ -0.56
VPS26A-209ENST00000497564 PIGBOS1A0A0B4J2F0 54 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 J3QR06 171 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 RAB29O14966 203 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 CCNKO75909 580 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 IGHV4-31P0DP07 118 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 CXCL3P19876 107 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 UCP1P25874 307 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 ZNF137PP52743 207 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 LIAT1Q6ZQX7 453 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 OR9G1Q8NH87 305 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 ASB13Q8WXK3 278 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 MSI2Q96DH6 328 aaKnown RBP11.57□□□□□ -0.56
VPS26A-209ENST00000497564 ST6GAL2Q96JF0 529 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 TMEM56Q96MV1 263 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 HSD17B10Q99714 261 aaKnown RBP11.57□□□□□ -0.56
VPS26A-209ENST00000497564 ZNF251Q9BRH9 671 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 TMEM222Q9H0R3 208 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 METTL8Q9H825 291 aaKnown RBP11.57□□□□□ -0.56
VPS26A-209ENST00000497564 YAE1D1Q9NRH1 226 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 MGAT4CQ9UBM8 478 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
VPS26A-209ENST00000497564 FAM157AC9JC47 383 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 TNFSF12O43508 249 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 PROP1O75360 226 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
VPS26A-209ENST00000497564 PRTN3P24158 256 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 GNG10P50151 68 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 LCN2P80188 198 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 CATR1Q13166 79 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 PRIMA1Q86XR5 153 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 BEND2Q8NDZ0 799 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 OR5M8Q8NGP6 311 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 IL22RA2Q969J5 263 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 RAB18Q9NP72 206 aa11.56□□□□□ -0.56
VPS26A-209ENST00000497564 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
VPS26A-209ENST00000497564 IGHV2-26A0A0B4J1V2 119 aa11.55□□□□□ -0.56
VPS26A-209ENST00000497564 A0A1W2PPE3 182 aa11.55□□□□□ -0.56
VPS26A-209ENST00000497564 DUXBA0A1W2PPF3 345 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms