RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ERCC8Q13216 396 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 EBPQ15125 230 aaKnown RBP4.34□□□□□ -1.71
BRCA1-224ENST00000497488 CDK10Q15131 360 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 C3orf33Q6P1S2 294 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 TMEM205Q6UW68 189 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 ALKAL1Q6UXT8 129 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF550Q7Z398 422 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 DEFB123Q8N688 67 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 ZNF645Q8N7E2 425 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 POM121L12Q8N7R1 296 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 OR4M1Q8NGD0 313 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 OR5K1Q8NHB7 308 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 ORAOV1Q8WV07 137 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 DCUN1D1Q96GG9 259 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 BMFQ96LC9 184 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 C1orf147Q96MC9 270 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-224ENST00000497488 OR2M2Q96R28 347 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 SOSTQ9BQB4 213 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 KIFC1Q9BW19 673 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 OR51I2Q9H344 312 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 NDUFAF1Q9Y375 327 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 HDGFL3Q9Y3E1 203 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 IGSF9BQ9UPX0 1349 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 SIP14410 1827 aa4.34□□□□□ -1.71
BRCA1-224ENST00000497488 CHD9Q3L8U1 2897 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 TRIOBPQ9H2D6 2365 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 PTPRSQ13332 1948 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 FAM159BA6NKW6 160 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 SRRM5B3KS81 715 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ANGPTL7O43827 346 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 STK16O75716 305 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 GIG44P09565 113 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-224ENST00000497488 NBEAP1P0C6P0 100 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 GADD45AP24522 165 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ELK4P28324 431 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 RBMXP38159 391 aaKnown RBP4.33□□□□□ -1.72
BRCA1-224ENST00000497488 CXCL5P42830 114 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 NMUP48645 174 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 MARCKSL1P49006 195 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 MP68P56378 58 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 SSX1Q16384 188 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ARHGAP11BQ3KRB8 267 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 LINC00303Q3SY05 128 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ATAD3CQ5T2N8 411 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 NXNL2Q5VZ03 156 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF774Q6NX45 483 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 FAAP20Q6NZ36 180 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 SHISA6Q6ZSJ9 500 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 C6orf120Q7Z4R8 191 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 FAM19A3Q7Z5A8 133 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 LINC00596Q86U02 117 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 TGIF2LYQ8IUE0 185 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 CEND1Q8N111 149 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-224ENST00000497488 JOSD2Q8TAC2 188 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 TWIST2Q8WVJ9 160 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 CPNE2Q96FN4 548 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-224ENST00000497488 SFRP2Q96HF1 295 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ANAPC13Q9BS18 74 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 GGTLC1Q9BX51 225 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF430Q9H8G1 570 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-224ENST00000497488 HES4Q9HCC6 221 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 IDI2-AS1Q9NZ38 188 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 TMEM216Q9P0N5 145 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 FAM32AQ9Y421 112 aaKnown RBP4.33□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF780BQ9Y6R6 833 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 CHD7Q9P2D1 2997 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 CEP290O15078 2479 aa4.33□□□□□ -1.72
BRCA1-224ENST00000497488 COL4A6Q14031 1691 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 A0A0G2JMP0 313 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 A0A0X1KG70 313 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 PQLC2LA1A4F0 135 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 OR6C6A6NF89 314 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 OR4C46A6NHA9 309 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 EEF1E1-BLOC1S5C9J1V9 151 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 INS-IGF2F8WCM5 200 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 TMEM250H0YL14 139 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 COPEO14579 308 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 EEF1E1O43324 174 aaKnown RBP4.32□□□□□ -1.72
BRCA1-224ENST00000497488 COX7A2P2O60397 106 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 IFNA1P01562 189 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 CRYBA1P05813 215 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 CRYGDP07320 174 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 GUSBP08236 651 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 NELFEP18615 380 aaKnown RBP4.32□□□□□ -1.72
BRCA1-224ENST00000497488 CD52P31358 61 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 GABRA4P48169 554 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 PPP1CAP62136 330 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 RPS24P62847 133 aaKnown RBP4.32□□□□□ -1.72
BRCA1-224ENST00000497488 BTN3A2P78410 334 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 PRDX4Q13162 271 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 BATFQ16520 125 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 LCN8Q6JVE9 175 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF773Q6PK81 442 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 IL34Q6ZMJ4 242 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 Q6ZRU5 148 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 NR2C2APQ86WQ0 139 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms