RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PITX2Q99697 317 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 NRTNQ99748 197 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 DCUN1D5Q9BTE7 237 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 KRTAP4-9Q9BYQ8 210 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 SLC22A4Q9H015 551 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 TMEM27Q9HBJ8 222 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 MYOZ1Q9NP98 299 aaPredicted RBP1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 IFT46Q9NQC8 304 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 FBXO6Q9NRD1 293 aaPredicted RBP1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 RBFOX1Q9NWB1 397 aaKnown RBP1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 RAB22AQ9UL26 194 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 ANKRD36A6QL64 1941 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 AGRNO00468 2067 aa1.65□□□□□ -2.15
CKS1BP2-201ENST00000497342 IGLV11-55A0A075B6I3 123 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 IGHV3-72A0A0B4J1Y9 119 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TRAV8-6A0A0B4J262 113 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 A0A0D9SFI3 127 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 A0A1B0GVX0 72 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 A0A1W2PP18 115 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 GJE1A6NN92 205 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CEACAM18A8MTB9 384 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 KRBOX1C9JBD0 128 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 UPK2O00526 184 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 BPY2O14599 106 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 GPR171O14626 319 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 FFAR1O14842 300 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 BIRC5O15392 142 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 KLRC4O43908 158 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 GCM2O75603 506 aaPredicted RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 RPP14O95059 124 aaKnown RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CA2P00918 260 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 HLA-DPB1P04440 258 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CECR9P0C854 216 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 RD3LP0DJH9 198 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 IGHV1-8P0DP01 117 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 SLC2A1P11166 492 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TCP1P17987 556 aaKnown RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 PRSS3P35030 304 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CDKN2CP42773 168 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 LGALS7P47929 136 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 NMUP48645 174 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ACOT2P49753 483 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CAV2P51636 162 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 GNB2P62879 340 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CACNG7P62955 275 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 IGLV3-21P80748 117 aaPredicted RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 PPIDQ08752 370 aaKnown RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 MLLT11Q13015 90 aaPredicted RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 BAMBIQ13145 260 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TRIP13Q15645 432 aaPredicted RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ZSCAN26Q16670 478 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TMEM183BQ1AE95 376 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TMEM176BQ3YBM2 270 aaPredicted RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 Q499Y3 187 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ORMDL2Q53FV1 153 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ACTBL2Q562R1 376 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 MARC1Q5VT66 337 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 HHATQ5VTY9 493 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 RSBN1Q5VWQ0 802 aaPredicted RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 METTL21CQ5VZV1 264 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 FBXW9Q5XUX1 488 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 GLYATQ6IB77 296 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 C22orf39Q6P5X5 142 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TMEM205Q6UW68 189 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 UGT2A3Q6UWM9 527 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 SHISA6Q6ZSJ9 500 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ZNF550Q7Z398 422 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 MTERF4Q7Z6M4 381 aaKnown RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TMEM183AQ8IXX5 376 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 C10orf67Q8IYJ2 551 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ATPAF2Q8N5M1 289 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 GATD1Q8NB37 220 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TMEM161BQ8NDZ6 487 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 OR8G5Q8NG78 346 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 OR2M7Q8NG81 312 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 OR13G1Q8NGZ3 307 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 OR1L1Q8NH94 360 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 LINC01006Q8NI28 216 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 C15orf40Q8WUR7 153 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 C22orf15Q8WYQ4 148 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CCL17Q92583 94 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ANP32BQ92688 251 aaKnown RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 PTX4Q96A99 478 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 ISOC1Q96CN7 298 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CAPZA3Q96KX2 299 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 IMMP1LQ96LU5 166 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 CAMK2N2Q96S95 79 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 GPR22Q99680 433 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 KRTAP4-11Q9BYQ6 195 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 NSRP1Q9H0G5 558 aaKnown RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 SLC40A1Q9NP59 571 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 SLCO1B3Q9NPD5 702 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 DIABLOQ9NR28 239 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 TNFRSF19Q9NS68 423 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 DNAJC27Q9NZQ0 273 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 COMMD9Q9P000 198 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 PCYOX1Q9UHG3 505 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 NUFIP1Q9UHK0 495 aaKnown RBP1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 PRO0628Q9UI54 55 aa1.64□□□□□ -2.15
CKS1BP2-201ENST00000497342 SLC22A13Q9Y226 551 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms