RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 IGLV1-44P01699 117 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 CHTF8P0CG12 524 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 SPNP16150 400 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 ATF1P18846 271 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 MIPP30301 263 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 P2RX1P51575 399 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 VSX2P58304 361 aaPredicted RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 CXCL6P80162 114 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 PSG4Q00888 419 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 CD47Q08722 323 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 GINS1Q14691 196 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 HERPUD1Q15011 391 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 RSU1Q15404 277 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 FCN2Q15485 313 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 GUCA2BQ16661 112 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 ACSBG2Q5FVE4 666 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 HES3Q5TGS1 186 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 SPATA31B1PQ5VZV4 182 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 PLET1Q6UQ28 207 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 UGT2A3Q6UWM9 527 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 CLEC19AQ6UXS0 136 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF493Q6ZR52 646 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 OLIG3Q7RTU3 272 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 NEGR1Q7Z3B1 354 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 MUC15Q8N387 334 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 COX18Q8N8Q8 333 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 C12orf29Q8N999 325 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 WFDC11Q8NEX6 87 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 OR10D3Q8NH80 312 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 AURKBQ96GD4 344 aaPredicted RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 OR2M4Q96R27 311 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 OR5M11Q96RB7 305 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 OR52B2Q96RD2 323 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 PLEKHF1Q96S99 279 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 TIPINQ9BVW5 301 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 C6orf62Q9GZU0 229 aaPredicted RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 Q9H3A6 140 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 BOLA2Q9H3K6 86 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 FGF22Q9HCT0 170 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 DMAC2Q9NW81 257 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 RBM12B-AS1Q9P1G2 102 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 OR12D3Q9UGF7 316 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF223Q9UK11 482 aaPredicted RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 GINS2Q9Y248 185 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 LSM5Q9Y4Y9 91 aaKnown RBP2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 PTPRDP23468 1912 aa2.69□□□□□ -1.98
EXOSC3-208ENST00000496910 TRAV8-2A0A0B4J237 113 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 IGHV1-69DA0A0B4J2H0 117 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 OR6C6A6NF89 314 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 KRTAP4-16G5E9R7 235 aaPredicted RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 SOCS3O14543 225 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 PDCD6O75340 191 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 IL3P08700 152 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 GTF2F2P13984 249 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 FOLR2P14207 255 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 PGAM2P15259 253 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 MYL12AP19105 171 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 RAB3AP20336 220 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 ELK4P28324 431 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 POLR2IP36954 125 aaKnown RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 CDK9P50750 372 aaKnown RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 MNAT1P51948 309 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 GTF2A1P52655 376 aaPredicted RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 RAB25P57735 213 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 KRTAP10-6P60371 365 aaPredicted RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 TFAMQ00059 246 aaKnown RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 LAMTOR4Q0VGL1 99 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 IHHQ14623 411 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 PMVKQ15126 192 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 C14orf177Q52M58 125 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 TRMT12Q53H54 448 aaKnown RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 PRR30Q53SZ7 412 aaPredicted RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 FAM162BQ5T6X4 162 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 FAM71E1Q6IPT2 247 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 PAMR1Q6UXH9 720 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 ALKAL1Q6UXT8 129 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 TMUB2Q71RG4 321 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 GALNT10Q86SR1 603 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 C11orf53Q8IXP5 236 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 SMIM20Q8N5G0 67 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 SLC26A10Q8NG04 563 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 OR4X1Q8NH49 305 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 OR4S2Q8NH73 311 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 NPRL2Q8WTW4 380 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 DYDC1Q8WWB3 177 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 CYGBQ8WWM9 190 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 TMEM159Q96B96 161 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 VSIG2Q96IQ7 327 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 SLC45A3Q96JT2 553 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 CEP170P1Q96L14 293 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 RNF157Q96PX1 679 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 EBF4Q9BQW3 602 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 OR11A1Q9GZK7 315 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 POLR2J2Q9GZM3 115 aaKnown RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 GFRA4Q9GZZ7 299 aa2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 POLR2J3Q9H1A7 115 aaKnown RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 TRMT112Q9UI30 125 aaKnown RBP2.68□□□□□ -1.98
EXOSC3-208ENST00000496910 PSG8Q9UQ74 426 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms