RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 OPN1MW3P0DN78 364 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 PTHLHP12272 177 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 GTF2F2P13984 249 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 ZNF823P16415 610 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 RPS27P42677 84 aaKnown RBP4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 RAB4BP61018 213 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 ARF6P62330 175 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 POLR2GP62487 172 aaKnown RBP eCLIP4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 BLOC1S1P78537 153 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 DEFA5Q01523 94 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 HERPUD1Q15011 391 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 ACTBL2Q562R1 376 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 LRRC10Q5BKY1 277 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 FAM76BQ5HYJ3 339 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 TMEM244Q5VVB8 128 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 IGFL4Q6B9Z1 124 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 HIST2H2BDQ6DRA6 164 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 C11orf87Q6NUJ2 197 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 FAAP20Q6NZ36 180 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 STEAP1BQ6NZ63 245 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 CORO6Q6QEF8 472 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 ALKAL2Q6UX46 152 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 COLCA1Q6ZS62 124 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 DCXRQ7Z4W1 244 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 ANGPTL5Q86XS5 388 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 LYPD6Q86Y78 171 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 LINC00346Q8IVM7 164 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 ZNF561Q8N587 486 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 OR4S1Q8NGB4 309 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 OR13C3Q8NGS6 347 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 OR2T6Q8NHC8 308 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 THAP6Q8TBB0 222 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 MRAPQ8TCY5 172 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 SFT2D1Q8WV19 159 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 RNF133Q8WVZ7 376 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 SEH1LQ96EE3 360 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 MALSU1Q96EH3 234 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 CXorf58Q96LI9 332 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 FXYD6Q9H0Q3 95 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 ATG5Q9H1Y0 275 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 OR51M1Q9H341 326 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 MOB1AQ9H8S9 216 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 SIRT7Q9NRC8 400 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 SMCO4Q9NRQ5 59 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 FAM206AQ9NX38 181 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 RPUSD1Q9UJJ7 312 aaKnown RBP4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 OR52A1Q9UKL2 312 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 RHBDD3Q9Y3P4 386 aa4.7□□□□□ -1.66
CACNA1C-229ENST00000496818 TEX13DA0A0J9YY54 714 aaPredicted RBP4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 ZNF816-ZNF321PA0A0X1KG74 233 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 C1orf196B1AJZ1 125 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 G3V4G9 280 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 RNASEK-C17orf49H0YIS7 233 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 AP4M1O00189 453 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 MFNGO00587 321 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 NPFFO15130 113 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 NDUFB3O43676 98 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 RAB3DO95716 219 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 PTBP3O95758 552 aaKnown RBP4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 CYB5AP00167 134 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 MT-ND4LP03901 98 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 RLN2P04090 185 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 CD3DP04234 171 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 RLN1P04808 185 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 H2BFMP0C1H6 154 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 MUC1P15941 1255 aaPredicted RBP4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 HSD11B1P28845 292 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 SAA4P35542 130 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 PRKXP51817 358 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 H2BFSP57053 126 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 HIST1H3AP68431 136 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 TAF13Q15543 124 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 ODF4Q2M2E3 257 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 SNAI3Q3KNW1 292 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 KRTAP27-1Q3LI81 207 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 C4orf46Q504U0 113 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 GLYATL3Q5SZD4 288 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 HIST2H3PS2Q5TEC6 136 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 TEX36Q5VZQ5 186 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 HIST2H3AQ71DI3 136 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 STX12Q86Y82 276 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 OR56B2PQ8NGI1 322 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 OR51S1Q8NGJ8 323 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 ABHD5Q8WTS1 349 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 LRRC29Q8WV35 223 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 TCTEX1D2Q8WW35 142 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 AQP3Q92482 292 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 H1FXQ92522 213 aaKnown RBP4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 PHB2Q99623 299 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 PAPOLGQ9BWT3 736 aaKnown RBP4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 NMES1Q9C002 83 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 NPFFR1Q9GZQ6 430 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 FAM234AQ9H0X4 552 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 SAV1Q9H4B6 383 aaPredicted RBP4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 KAAG1Q9UBP8 84 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 RAB22AQ9UL26 194 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 GTF2A1LQ9UNN4 478 aa4.69□□□□□ -1.66
CACNA1C-229ENST00000496818 TANC2Q9HCD6 1990 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms