RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 ADH4P08319 380 aa15.51■□□□□ 0.07
TSPAN4-212ENST00000494815 OR4A8P0C604 315 aa15.51■□□□□ 0.07
TSPAN4-212ENST00000494815 OR13C7P0DN81 318 aa15.51■□□□□ 0.07
TSPAN4-212ENST00000494815 TNFAIP6P98066 277 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-212ENST00000494815 C5orf24Q7Z6I8 188 aa15.51■□□□□ 0.07
TSPAN4-212ENST00000494815 K7N7A8 449 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 OR2C1O95371 312 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 EGR1P18146 543 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 GNRHRP30968 328 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 PPP1CCP36873 323 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 OR3A1P47881 315 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 RND3P61587 244 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 HOXA4Q00056 320 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 COL10A1Q03692 680 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 PHLDA2Q53GA4 152 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 NCMAPQ5T1S8 102 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 HEPN1Q6WQI6 88 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 LIAT1Q6ZQX7 453 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 H1FOOQ8IZA3 346 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 HSD17B11Q8NBQ5 300 aa15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 CHD3Q12873 2000 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-212ENST00000494815 PSG2P11465 335 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 PRDX2P32119 198 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 SPRNQ5BIV9 151 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 OR2W1Q9Y3N9 320 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 FAM90A27PA6NNH2 459 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 ATXN7O15265 892 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 SLC31A2O15432 143 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 ST8SIA3O43173 380 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 LY86O95711 162 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 SPCS3P61009 180 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 RAB2AP61019 212 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 NHLH2Q02577 135 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 C21orf62-AS1Q17RA5 79 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 SOHLH1Q5JUK2 328 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 TMEM182Q6ZP80 229 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 CD177Q8N6Q3 437 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 OR52M1Q8NGK5 317 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 FAM213BQ8TBF2 198 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 Q8TCH9 128 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 GCM1Q9NP62 436 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 KCNIP1Q9NZI2 227 aa15.49■□□□□ 0.07
TSPAN4-212ENST00000494815 ADORA2A-AS1P86434 159 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 SSX9Q7RTT3 188 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 IL1F10Q8WWZ1 152 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 COQ2Q96H96 371 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 GGACTQ9BVM4 153 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 TOLLIPQ9H0E2 274 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 RNF7Q9UBF6 113 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 RCL1Q9Y2P8 373 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 IGKV1D-17A0A075B6S4 117 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 IGKV1D-13A0A0B4J2D9 117 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 MPPED1O15442 326 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 CD55P08174 381 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 IGKV1-13P0DP09 117 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 HOXA5P20719 270 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 TAS2R60P59551 318 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 LGI3Q8N145 548 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 OR11L1Q8NGX0 322 aa15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 MSI2Q96DH6 328 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 PUS1Q9Y606 427 aaKnown RBP eCLIP15.48■□□□□ 0.07
TSPAN4-212ENST00000494815 ICE1Q9Y2F5 2266 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 TRAV39A0A0B4J263 110 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 OOEPA6NGQ2 149 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 SHISA9B4DS77 424 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 ZNF737O75373 536 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 AESQ08117 197 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 PPP1R35Q8TAP8 253 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 C14orf144Q96I85 54 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 METRNQ9UJH8 293 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 ADGRG4Q8IZF6 3080 aa15.47■□□□□ 0.07
TSPAN4-212ENST00000494815 NBASA2RRP1 2371 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 MED19A0JLT2 244 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 C17orf100A8MU93 164 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 NDUFB7P17568 137 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 KIAA0141Q14154 515 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 ZNF818PQ6ZRF7 136 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 CMTM1Q8IZ96 169 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 FAM222BQ8WU58 562 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 PLPPR2Q96GM1 343 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 RARRES2Q99969 163 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 TPRP12270 2363 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 A0A1B0GV50 99 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 TNFRSF1AP19438 455 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 GABRA2P47869 451 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 SRPXP78539 464 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 EWSR1Q01844 656 aaKnown RBP eCLIP15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 OR4D5Q8NGN0 318 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 SNX22Q96L94 193 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 UNKLQ9H9P5 680 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 OR1A1Q9P1Q5 309 aa15.46■□□□□ 0.07
TSPAN4-212ENST00000494815 PKD1L2Q7Z442 2459 aa15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 C3orf85A0A1B0GTC6 90 aa15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 NKX2-6A6NCS4 301 aa15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 HSPA12AO43301 675 aa15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 S100GP29377 79 aa15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 RPS10P46783 165 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 GNMTQ14749 295 aa15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 TESK1Q15569 626 aa15.45■□□□□ 0.06
TSPAN4-212ENST00000494815 PRR18Q8N4B5 295 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms