RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SLC25A38Q96DW6 304 aa17.82■□□□□ 0.44
SNIP1-203ENST00000493916 ZNF107Q9UII5 783 aaPredicted RBP17.82■□□□□ 0.44
SNIP1-203ENST00000493916 RRP9O43818 475 aaKnown RBP17.81■□□□□ 0.44
SNIP1-203ENST00000493916 PROP1O75360 226 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 HLA-DRB1P01911 266 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 IGF1P05019 195 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 PF4V1P10720 104 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 CNTFRP26992 372 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 PITPNAQ00169 270 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 ZNF260Q3ZCT1 412 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 KHDC1LQ5JSQ8 128 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 GLDNQ6ZMI3 551 aaPredicted RBP17.81■□□□□ 0.44
SNIP1-203ENST00000493916 OR5H6Q8NGV6 325 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 DCSTAMPQ9H295 470 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 RNF150Q9ULK6 438 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 WASHC3Q9Y3C0 194 aa17.81■□□□□ 0.44
SNIP1-203ENST00000493916 TMEM235A6NFC5 223 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 RBBP9O75884 186 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 RPL23AP62750 156 aaKnown RBP17.8■□□□□ 0.44
SNIP1-203ENST00000493916 PNLIPRP3Q17RR3 467 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 C5orf64Q2M2E5 130 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 CROCCP3Q8IVE0 287 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 RNF5Q99942 180 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 KIAA1456Q9P272 454 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 GAB2Q9UQC2 676 aa17.8■□□□□ 0.44
SNIP1-203ENST00000493916 IGKV1D-8A0A087WSZ0 117 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 A0A0A6YYH2 397 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 A6NJ64 397 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 WIPF1O43516 503 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 TFAP2AP05549 437 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 TGFBR1P36897 503 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 CFHR3Q02985 330 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 TEX38Q6PEX7 206 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 NUDCD2Q8WVJ2 157 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 GINS4Q9BRT9 223 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 ZFP57Q9NU63 452 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 SPATA2Q9UM82 520 aa17.79■□□□□ 0.44
SNIP1-203ENST00000493916 H7C2Y5 167 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 VDAC1P21796 283 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 SLC6A1P30531 599 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 GNG2P59768 71 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 SAMD5Q5TGI4 173 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 H1FOOQ8IZA3 346 aaPredicted RBP17.78■□□□□ 0.44
SNIP1-203ENST00000493916 RNF152Q8N8N0 203 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 ZNF383Q8NA42 475 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 DRAXINQ8NBI3 349 aaPredicted RBP17.78■□□□□ 0.44
SNIP1-203ENST00000493916 OR2D2Q9H210 308 aa17.78■□□□□ 0.44
SNIP1-203ENST00000493916 G3V4G9 280 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 SSX5O60225 188 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 OR8U9P0C7N5 309 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 FOXE3Q13461 319 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 KPRPQ5T749 579 aaPredicted RBP17.77■□□□□ 0.44
SNIP1-203ENST00000493916 PDPNQ86YL7 162 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 C1QL4Q86Z23 238 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 WFDC9Q8NEX5 89 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 OR8U1Q8NH10 309 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 ST6GALNAC5Q9BVH7 336 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 OR51J1Q9H342 316 aa17.77■□□□□ 0.44
SNIP1-203ENST00000493916 IGHV7-81A0A0B4J1V7 117 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 M0R1X1 148 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 RRHO14718 337 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 IGHG4P01861 327 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 APOA2P02652 100 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 PF4P02776 101 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 CTXN2P0C2S0 81 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 OR5H8P0DN80 308 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 RPS19P39019 145 aaKnown RBP17.76■□□□□ 0.43
SNIP1-203ENST00000493916 LIN54Q6MZP7 749 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 SDHAF2Q9NX18 166 aa17.76■□□□□ 0.43
SNIP1-203ENST00000493916 ELANEP08246 267 aa17.75■□□□□ 0.43
SNIP1-203ENST00000493916 LSM3P62310 102 aaKnown RBP17.75■□□□□ 0.43
SNIP1-203ENST00000493916 BEAN1Q3B7T3 259 aa17.75■□□□□ 0.43
SNIP1-203ENST00000493916 OR13F1Q8NGS4 319 aa17.75■□□□□ 0.43
SNIP1-203ENST00000493916 C5orf30Q96GV9 206 aa17.75■□□□□ 0.43
SNIP1-203ENST00000493916 PLXNB1O43157 2135 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 TRAV18A0A075B6X5 111 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 ATP6V0E1O15342 81 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 SPDEFO95238 335 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 IGKV1-16P04430 117 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 LINC00205P59089 165 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 PDLIM3Q53GG5 364 aaPredicted RBP17.74■□□□□ 0.43
SNIP1-203ENST00000493916 CXorf66Q5JRM2 361 aaPredicted RBP17.74■□□□□ 0.43
SNIP1-203ENST00000493916 CNIH2Q6PI25 160 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 TSNAXQ99598 290 aaKnown RBP17.74■□□□□ 0.43
SNIP1-203ENST00000493916 FUNDC2Q9BWH2 189 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 FBXL15Q9H469 300 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 DIABLOQ9NR28 239 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 ANXA10Q9UJ72 324 aa17.74■□□□□ 0.43
SNIP1-203ENST00000493916 RBM7Q9Y580 266 aaKnown RBP17.74■□□□□ 0.43
SNIP1-203ENST00000493916 RPLP1P05386 114 aaKnown RBP17.73■□□□□ 0.43
SNIP1-203ENST00000493916 SMIM18P0DKX4 95 aa17.73■□□□□ 0.43
SNIP1-203ENST00000493916 CD33P20138 364 aa17.73■□□□□ 0.43
SNIP1-203ENST00000493916 TAGLNQ01995 201 aaKnown RBP17.73■□□□□ 0.43
SNIP1-203ENST00000493916 ZNF660Q6AZW8 331 aaPredicted RBP17.73■□□□□ 0.43
SNIP1-203ENST00000493916 ETV3LQ6ZN32 361 aa17.73■□□□□ 0.43
SNIP1-203ENST00000493916 KLHL30-AS1Q8NEE0 82 aa17.73■□□□□ 0.43
SNIP1-203ENST00000493916 PARP11Q9NR21 331 aa17.73■□□□□ 0.43
SNIP1-203ENST00000493916 SLC35D1Q9NTN3 355 aa17.73■□□□□ 0.43
SNIP1-203ENST00000493916 PSMB8P28062 276 aa17.72■□□□□ 0.43
SNIP1-203ENST00000493916 PPIFP30405 207 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms