RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 IFITM5A6NNB3 132 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 G3V318 75 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 RAB29O14966 203 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 RAB3BP20337 219 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 VDAC1P21796 283 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 ZBTB25P24278 435 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
COL6A3-214ENST00000493608 RAB25P57735 213 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 LINC00205P59089 165 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 GABARAPL2P60520 117 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 DEFB136Q30KP8 78 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 CD200R1LQ6Q8B3 271 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 MOB1BQ7L9L4 216 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 NR2C2APQ86WQ0 139 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF695Q8IW36 515 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 RAB3CQ96E17 227 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 KCTD7Q96MP8 289 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 AGMATQ9BSE5 352 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 C12orf4Q9NQ89 552 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 ZFP57Q9NU63 452 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 PIPOXQ9P0Z9 390 aa8.35□□□□□ -1.07
COL6A3-214ENST00000493608 ZNF230Q9UIE0 474 aaPredicted RBP8.35□□□□□ -1.07
COL6A3-214ENST00000493608 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 TRDCB7Z8K6 153 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 H7C2Y5 167 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 BET1O15155 118 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 NBR2O15453 112 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 RRP9O43818 475 aaKnown RBP8.34□□□□□ -1.07
COL6A3-214ENST00000493608 PROP1O75360 226 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 GSTT2P0CG29 244 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 GSTT2BP0CG30 244 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 KRTAP10-11P60412 298 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 C5orf64Q2M2E5 130 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 IGSF11Q5DX21 431 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 CXorf66Q5JRM2 361 aaPredicted RBP8.34□□□□□ -1.07
COL6A3-214ENST00000493608 UBE2UQ5VVX9 321 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 LIN54Q6MZP7 749 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 COMMD1Q8N668 190 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 OR10R2Q8NGX6 335 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 RCC1LQ96I51 464 aaKnown RBP8.34□□□□□ -1.07
COL6A3-214ENST00000493608 RAX2Q96IS3 184 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 CLCC1Q96S66 551 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 GON7Q9BXV9 100 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 ATG5Q9H1Y0 275 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 FBXL15Q9H469 300 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 Q9H521 79 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 PARP11Q9NR21 331 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 TXNL4BQ9NX01 149 aaKnown RBP8.34□□□□□ -1.07
COL6A3-214ENST00000493608 RDH8Q9NYR8 311 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 KIAA1456Q9P272 454 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 ELF5Q9UKW6 265 aaPredicted RBP8.34□□□□□ -1.07
COL6A3-214ENST00000493608 MGAT4AQ9UM21 535 aa8.34□□□□□ -1.07
COL6A3-214ENST00000493608 H0YJW9 148 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 CCL24O00175 119 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 RAB27BO00194 218 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 FCN1O00602 326 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 ATP6V0E1O15342 81 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 MRPS14O60783 128 aaKnown RBP8.33□□□□□ -1.08
COL6A3-214ENST00000493608 IGF1P05019 195 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 ELANEP08246 267 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 MYCNOSP40205 109 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 MRPS15P82914 257 aaKnown RBP8.33□□□□□ -1.08
COL6A3-214ENST00000493608 CFHR3Q02985 330 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 FOXE3Q13461 319 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 PLGLAQ15195 96 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 NPBQ8NG41 125 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 OR51E2Q9H255 320 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 KLK15Q9H2R5 256 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 OR51J1Q9H342 316 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 ZNF221Q9UK13 617 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 A3GALT2U3KPV4 340 aa8.33□□□□□ -1.08
COL6A3-214ENST00000493608 WI2-2373I1.2A0A1W2PRP0 233 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 ITGB1BP1O14713 200 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 FABP7O15540 132 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 NDUFA3O95167 84 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 IGHG4P01861 327 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 HLA-DRB1P01911 266 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 FCGR3AP08637 254 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 OR8U9P0C7N5 309 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 GADD45AP24522 165 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 RANBP1P43487 201 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 CDX1P47902 265 aaPredicted RBP8.32□□□□□ -1.08
COL6A3-214ENST00000493608 RPS16P62249 146 aaKnown RBP8.32□□□□□ -1.08
COL6A3-214ENST00000493608 NDPQ00604 133 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 ARFRP1Q13795 201 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 DEFB121Q5J5C9 76 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 FAM71F2Q6NXP2 309 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 REC114Q7Z4M0 266 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 ZNF383Q8NA42 475 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 OR8U1Q8NH10 309 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 CASTOR1Q8WTX7 329 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 PTX4Q96A99 478 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 OR5B12Q96R08 314 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 P2RX4Q99571 388 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 YTHDF1Q9BYJ9 559 aaKnown RBP8.32□□□□□ -1.08
COL6A3-214ENST00000493608 DAPK2Q9UIK4 370 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 STUB1Q9UNE7 303 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 SSR3Q9UNL2 185 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 GAB2Q9UQC2 676 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms