RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FASP25445 335 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 SSBP2P81877 361 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 RIPK1Q13546 671 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 DEFB114Q30KQ6 69 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 DNAL1Q4LDG9 190 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 C5orf24Q7Z6I8 188 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
PRPF40A-211ENST00000493468 A0A0J9YWU9 116 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 UBE2QL1A1L167 161 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 SNRPBP14678 240 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 CAPGP40121 348 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 LGALS7P47929 136 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 GNGT1P63211 74 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 EWSR1Q01844 656 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 CCDC58Q4VC31 144 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 SIGIRRQ6IA17 410 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 SLC16A13Q7RTY0 426 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 Q96M66 194 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 TECRQ9NZ01 308 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 ABRACLQ9P1F3 81 aa10.68□□□□□ -0.7
PRPF40A-211ENST00000493468 PKHD1P08F94 4074 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 ABCA13Q86UQ4 5058 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 BMPR1BO00238 502 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 PDCD6O75340 191 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 IGKV1-16P04430 117 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 MGMTP16455 207 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 CPEP16870 476 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 KIR2DS2P43631 304 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 GTF2A1P52655 376 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 GUCA2BQ16661 112 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 GLIPR1L1Q6UWM5 242 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 LYG2Q86SG7 212 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 PDPNQ86YL7 162 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 AGMATQ9BSE5 352 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 SELENOIQ9C0D9 397 aa10.67□□□□□ -0.7
PRPF40A-211ENST00000493468 LOC102724200A0A096LPH7 203 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 H3BNX3 289 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 FCGR1AP12314 374 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 RPS16P62249 146 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 DEFA5Q01523 94 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 CDH26Q8IXH8 852 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 MUL1Q969V5 352 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 BANF2Q9H503 90 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 OAZ3Q9UMX2 235 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 MUC4Q99102 2169 aa10.66□□□□□ -0.7
PRPF40A-211ENST00000493468 MSGN1A6NI15 193 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 C2orf70A6NJV1 201 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 FAM223BA6NKX1 122 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 GYG2O15488 501 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 RBMXL2O75526 392 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 BMI1P35226 326 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 FAM209BQ5JX69 171 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 AWAT2Q6E213 333 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 Q6ZWC4 215 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 AMIGO2Q86SJ2 522 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 FAM223AQ8IWN6 122 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 IL1F10Q8WWZ1 152 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 EDARADDQ8WWZ3 215 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 WDR89Q96FK6 387 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 CYYR1Q96J86 154 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 PARP12Q9H0J9 701 aaKnown RBP10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 COA4Q9NYJ1 87 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 CKLFQ9UBR5 152 aa10.65□□□□□ -0.7
PRPF40A-211ENST00000493468 TRBV5-5A0A0J9YX44 114 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 PROP1O75360 226 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 CRTAPO75718 401 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 IGLV2-23P01705 113 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 APOA2P02652 100 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 CRYGBP07316 175 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 FOLR2P14207 255 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 GABRB1P18505 474 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 XAF1Q6GPH4 301 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 ZNF880Q6PDB4 577 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 MOB1BQ7L9L4 216 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 SVOPQ8N4V2 548 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 JAGN1Q8N5M9 183 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 TMEM217Q8N7C4 229 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 ZNF383Q8NA42 475 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 ADAD2Q8NCV1 583 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 ORAI1Q96D31 301 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 ZNF230Q9UIE0 474 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 AP4S1Q9Y587 144 aa10.64□□□□□ -0.71
PRPF40A-211ENST00000493468 TRAV8-7A0A075B6U6 113 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 LGALS9O00182 355 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 BAG2O95816 211 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 OR9G9P0C7N8 305 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 LIMS3P0CW19 117 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 LIMS4P0CW20 117 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 PJVKQ0ZLH3 352 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 EXOSC2Q13868 293 aaKnown RBP10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 DRAXINQ8NBI3 349 aaPredicted RBP10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 PTX4Q96A99 478 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 SMIM19Q96E16 107 aa10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 CENPNQ96H22 339 aaPredicted RBP10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 MRPS18AQ9NVS2 196 aaKnown RBP10.63□□□□□ -0.71
PRPF40A-211ENST00000493468 FAT2Q9NYQ8 4349 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms