RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 IGHV1-69P01742 117 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 ECI1P42126 302 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 FOXL1Q12952 345 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 DEFB112Q30KQ8 113 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 AADACL3Q5VUY0 350 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 ZNF626Q68DY1 528 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 LHFPL1Q86WI0 220 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 C8orf31Q8N9H6 132 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 OR13C8Q8NGS7 320 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 MARCH1Q8TCQ1 289 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 IFI27L2Q9H2X8 130 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 CCL28Q9NRJ3 127 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 PIPOXQ9P0Z9 390 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 SOX21Q9Y651 276 aaPredicted RBP10.88□□□□□ -0.67
MSH6-208ENST00000493177 ATRQ13535 2644 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 RAB29O14966 203 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 NPFFO15130 113 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
MSH6-208ENST00000493177 IGLV1-47P01700 117 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 CRYBA1P05813 215 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 HTR1DP28221 377 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 BTCP35070 178 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 RBMS2Q15434 407 aaKnown RBP10.87□□□□□ -0.67
MSH6-208ENST00000493177 ABCA11PQ4W5N1 156 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 LPCAT3Q6P1A2 487 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 SLC38A6Q8IZM9 456 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 ZNF645Q8N7E2 425 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 OR4P4Q8NGL7 312 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 SCGB3A2Q96PL1 93 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 S1PR3Q99500 378 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 SLC25A21Q9BQT8 299 aaPredicted RBP10.87□□□□□ -0.67
MSH6-208ENST00000493177 C14orf166Q9Y224 244 aaKnown RBP10.87□□□□□ -0.67
MSH6-208ENST00000493177 FAM96BQ9Y3D0 163 aa10.87□□□□□ -0.67
MSH6-208ENST00000493177 SAA2-SAA4A0A096LPE2 208 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 LEUTXA8MZ59 168 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 BUB1B-PAK6H3BSN5 160 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 GPR31O00270 319 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 SLC22A5O76082 557 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 RLN1P04808 185 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 RNASE1P07998 156 aaKnown RBP10.86□□□□□ -0.67
MSH6-208ENST00000493177 SAA2P0DJI9 122 aaPredicted RBP10.86□□□□□ -0.67
MSH6-208ENST00000493177 S100GP29377 79 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 CEACAM3P40198 252 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 UCP3P55916 312 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 SLC9A3R2Q15599 337 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 RGS21Q2M5E4 152 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 PHLDA2Q53GA4 152 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 RPL39P5Q59GN2 51 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 NRARPQ7Z6K4 114 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 LHFPL4Q7Z7J7 247 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 LDLRAD3Q86YD5 345 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 RPEQ96AT9 228 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 AGMATQ9BSE5 352 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 SDHAF2Q9NX18 166 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 DPM3Q9P2X0 92 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 TBL2Q9Y4P3 447 aaKnown RBP10.86□□□□□ -0.67
MSH6-208ENST00000493177 COL6A5A8TX70 2615 aa10.86□□□□□ -0.67
MSH6-208ENST00000493177 M0R1X1 148 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 TNFSF12O43508 249 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 NDUFB6O95139 128 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 CTSDP07339 412 aaPredicted RBP10.85□□□□□ -0.67
MSH6-208ENST00000493177 HKR1P10072 659 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 PI3P19957 117 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 SLC6A1P30531 599 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 SAA4P35542 130 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 REG1BP48304 166 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 SURF2Q15527 256 aaPredicted RBP10.85□□□□□ -0.67
MSH6-208ENST00000493177 MIDNQ504T8 468 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 AWAT1Q58HT5 328 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 TPTE2P1Q5T6R2 138 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 MINOS1Q5TGZ0 78 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 TMED4Q7Z7H5 227 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 ODF3L1Q8IXM7 274 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 CMTM1Q8IZ96 169 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 DRAM1Q8N682 238 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 MRGPRFQ96AM1 343 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 AKR1E2Q96JD6 320 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 RSRP1Q9BUV0 290 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 GHITMQ9H3K2 345 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 COPZ2Q9P299 210 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 VSIG4Q9Y279 399 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 HILPDAQ9Y5L2 63 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 MINOS1-NBL1R4GNA1 71 aa10.85□□□□□ -0.67
MSH6-208ENST00000493177 MXRA5Q9NR99 2828 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 TRAV6A0A075B6T7 132 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 BTBD17A6NE02 478 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 CLDN34H7C241 214 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 ARPC1BO15143 372 aaKnown RBP10.84□□□□□ -0.67
MSH6-208ENST00000493177 PTTG1O95997 202 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 TCRBP04435 133 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 GNRHRP30968 328 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 COMPP49747 757 aaPredicted RBP10.84□□□□□ -0.67
MSH6-208ENST00000493177 DIAPH2-AS1Q14236 149 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 SSX2Q16385 188 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 PLA1AQ53H76 456 aa10.84□□□□□ -0.67
MSH6-208ENST00000493177 ZNF833PQ6ZTB9 187 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms