RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TMEM256Q8N2U0 113 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 LINC00301Q8NCQ3 95 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 PYDC1Q8WXC3 89 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 FLYWCH2Q96CP2 140 aaKnown RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 ZNF75AQ96N20 296 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 OR2A5Q96R48 311 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 C12orf57Q99622 126 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 RBBP8Q99708 897 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 MS4A12Q9NXJ0 267 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 CSPG4Q6UVK1 2322 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 CCDC168Q8NDH2 2452 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 SPEGQ15772 3267 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 NBEAQ8NFP9 2946 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 C11orf94C9JXX5 98 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 J3QT63 122 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 PSMD12O00232 456 aaPredicted RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 NDUFS5O43920 106 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 EFNA4P52798 201 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 CRADDP78560 199 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 KRTAP27-1Q3LI81 207 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 TMEM255AQ5JRV8 349 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 RNF185Q96GF1 192 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 SMIM8Q96KF7 97 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 CNBD2Q96M20 576 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 ZNRD1Q9P1U0 126 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 PRO0628Q9UI54 55 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 SIGLEC7Q9Y286 467 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.1□□□□□ -2.07
SNX13-209ENST00000492626 DNAH12Q6ZR08 3092 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 B4DSR2 109 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 KRTAP4-16G5E9R7 235 aaPredicted RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 BET1O15155 118 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 POP7O75817 140 aaKnown RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 RCBTB2O95199 551 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 TNNC2P02585 160 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 CD79BP40259 229 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 PMVKQ15126 192 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 CDK10Q15131 360 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 TOMM34Q15785 309 aaPredicted RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 RBM48Q5RL73 367 aaKnown RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 LAMTOR1Q6IAA8 161 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 OR5W2Q8NH69 310 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 RAD51AP1Q96B01 352 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 OLFM3Q96PB7 478 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 DOK1Q99704 481 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 ANAPC13Q9BS18 74 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 FBXO6Q9NRD1 293 aaPredicted RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 RBM22Q9NW64 420 aaKnown RBP eCLIP2.1□□□□□ -2.07
SNX13-209ENST00000492626 RSL24D1Q9UHA3 163 aaKnown RBP2.1□□□□□ -2.07
SNX13-209ENST00000492626 OR51B4Q9Y5P0 310 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 TMEM14AQ9Y6G1 99 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 ZNF780BQ9Y6R6 833 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 GTF3C1Q12789 2109 aa2.1□□□□□ -2.07
SNX13-209ENST00000492626 PVALEFA0A1B0GWK0 134 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 TMEM223A0PJW6 202 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 LINC01619G3V211 115 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 TXNDC9O14530 226 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 SLC31A1O15431 190 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 SNAI2O43623 268 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 PLIN3O60664 434 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 IGLV2-23P01705 113 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 ZNF17P17021 662 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 PHBP35232 272 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 PRLHRP49683 370 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 GNB2P62879 340 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 OOSP2Q86WS3 158 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 RIMKLAQ8IXN7 391 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 CDRT4Q8N9R6 151 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 FAM172AQ8WUF8 416 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 BLNKQ8WV28 456 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 YIPF5Q969M3 257 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 ARL2BPQ9Y2Y0 163 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 TSSC4Q9Y5U2 329 aaPredicted RBP2.09□□□□□ -2.07
SNX13-209ENST00000492626 CFAP47Q6ZTR5 3102 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 DNAH14Q0VDD8 3507 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 JMJD1CQ15652 2540 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 C9JQL5 133 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 PSPHP1O15172 72 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 DENRO43583 198 aaKnown RBP2.09□□□□□ -2.07
SNX13-209ENST00000492626 REM1O75628 298 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 C1GALT1C1LP0DN25 315 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 MLNP12872 115 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 VBP1P61758 197 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 GUSBP1Q15486 140 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 RSPO1Q2MKA7 263 aaPredicted RBP2.09□□□□□ -2.07
SNX13-209ENST00000492626 LCE1AQ5T7P2 110 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 ZNF773Q6PK81 442 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 CLEC19AQ6UXS0 136 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 C11orf72Q8NBR9 251 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 OR10G2Q8NGC3 310 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 OR6N1Q8NGY5 312 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 OR2L8Q8NGY9 312 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 TWIST2Q8WVJ9 160 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 LRRC58Q96CX6 371 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 NXF2Q9GZY0 626 aaKnown RBP2.09□□□□□ -2.07
SNX13-209ENST00000492626 USE1Q9NZ43 259 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 POFUT2Q9Y2G5 429 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 SNX24Q9Y343 169 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 PPIL1Q9Y3C6 166 aa2.09□□□□□ -2.07
SNX13-209ENST00000492626 SPTBN1Q01082 2364 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms