RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 OMGP23515 440 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 ZFP36P26651 326 aaKnown RBP7.89□□□□□ -1.15
USP54-214ENST00000492357 MC5RP33032 325 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 UBE2E1P51965 193 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 SRSF4Q08170 494 aaKnown RBP7.89□□□□□ -1.15
USP54-214ENST00000492357 BAMBIQ13145 260 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 CBX3Q13185 183 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 MIDNQ504T8 468 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 CCDC144NLQ6NUI1 221 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 LIAT1Q6ZQX7 453 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 TBC1D26Q86UD7 250 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 FAM219AQ8IW50 185 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 Q8N7P7 452 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 LINC01356Q8N9X3 169 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 ADAD2Q8NCV1 583 aaKnown RBP7.89□□□□□ -1.15
USP54-214ENST00000492357 NRGNQ92686 78 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 ST6GALNAC6Q969X2 333 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 REG4Q9BYZ8 158 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 ZFP57Q9NU63 452 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 SDHAF2Q9NX18 166 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 COMMD9Q9P000 198 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 ONECUT1Q9UBC0 465 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 KCNS2Q9ULS6 477 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 UNC79Q9P2D8 2635 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 AKAP6Q13023 2319 aa7.89□□□□□ -1.15
USP54-214ENST00000492357 IGHV3-43A0A0B4J1X8 118 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 FAM90A9PA6NNJ1 464 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 ODF3BA8MYP8 253 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 LEUTXA8MZ59 168 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 MMP23AO75900 390 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 OR2A4O95047 310 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 IFNA21P01568 189 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 SERPINE2P07093 398 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 IGHV3-43DP0DP04 118 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 MMP9P14780 707 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 EPHA1P21709 976 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 VDAC1P21796 283 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 DUTP33316 252 aaKnown RBP7.88□□□□□ -1.15
USP54-214ENST00000492357 RAB13P51153 203 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 ZNF134P52741 427 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 ZNF816Q0VGE8 651 aaPredicted RBP7.88□□□□□ -1.15
USP54-214ENST00000492357 TMEM187Q14656 261 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 OR8H3Q8N146 312 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 OR5M8Q8NGP6 311 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 OR10X1Q8NGY0 326 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 GLYATL2Q8WU03 294 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 CAPSLQ8WWF8 208 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 RBPMSQ93062 196 aaKnown RBP7.88□□□□□ -1.15
USP54-214ENST00000492357 LSM10Q969L4 123 aaKnown RBP7.88□□□□□ -1.15
USP54-214ENST00000492357 MSI2Q96DH6 328 aaKnown RBP7.88□□□□□ -1.15
USP54-214ENST00000492357 ABHD14BQ96IU4 210 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 OR2A7Q96R45 310 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 SPIN2AQ99865 258 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 RNF5Q99942 180 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 SPIN2BQ9BPZ2 258 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 ZNF251Q9BRH9 671 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 SEC22CQ9BRL7 303 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 PARP12Q9H0J9 701 aaKnown RBP7.88□□□□□ -1.15
USP54-214ENST00000492357 NARFLQ9H6Q4 476 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 PLEKHA2Q9HB19 425 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 UTP20O75691 2785 aaKnown RBP7.88□□□□□ -1.15
USP54-214ENST00000492357 APCP25054 2843 aa7.88□□□□□ -1.15
USP54-214ENST00000492357 CENPEQ02224 2701 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 FASNP49327 2511 aaKnown RBP7.87□□□□□ -1.15
USP54-214ENST00000492357 SAA2-SAA4A0A096LPE2 208 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 FAM157AC9JC47 383 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 BUB1B-PAK6H3BSN5 160 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 HSD17B6O14756 317 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 TOX4O94842 621 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 LY86O95711 162 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 HPRT1P00492 218 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 APOA2P02652 100 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 GAPDHP04406 335 aaKnown RBP7.87□□□□□ -1.15
USP54-214ENST00000492357 GIPP09681 153 aaPredicted RBP7.87□□□□□ -1.15
USP54-214ENST00000492357 OR5AC1P0C628 307 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 SAA2P0DJI9 122 aaPredicted RBP7.87□□□□□ -1.15
USP54-214ENST00000492357 PI3P19957 117 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 HTR1DP28221 377 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 RAP2BP61225 183 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 ARF6P62330 175 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 LCN2P80188 198 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 HABP2Q14520 560 aaPredicted RBP7.87□□□□□ -1.15
USP54-214ENST00000492357 POU2AF1Q16633 256 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 PHLDA2Q53GA4 152 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 DCAF12L2Q5VW00 463 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 AKAP14Q86UN6 197 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 KRTAP1-3Q8IUG1 177 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 ODF3L1Q8IXM7 274 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 TCTE3Q8IZS6 198 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 LYG1Q8N1E2 194 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 OR5AN1Q8NGI8 311 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 OR4S2Q8NH73 311 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 OSR1Q8TAX0 266 aaPredicted RBP7.87□□□□□ -1.15
USP54-214ENST00000492357 UBALD1Q8TB05 177 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 DDB2Q92466 427 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 COA4Q9NYJ1 87 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 DPM3Q9P2X0 92 aa7.87□□□□□ -1.15
USP54-214ENST00000492357 LY6LH3BQJ8 138 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 PFDN1O60925 122 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 PROP1O75360 226 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms