RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	TPRA1	Q86W33	373 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	NPB	Q8NG41	125 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	FAM3D	Q96BQ1	224 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	RITA1	Q96K30	269 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	ASCL2	Q99929	193 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	LPAR5	Q9H1C0	372 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	VCX3A	Q9NNX9	186 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170	PIPOX	Q9P0Z9	390 aa		11.92	□□□□□ -0.5
MRPL55-231	ENST00000492170		A0A0A6YYD4	124 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	SMIM18	P0DKX4	95 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	CLDN12	P56749	244 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	ECSCR	Q19T08	205 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	FAM131A	Q6UXB0	335 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	MOB1B	Q7L9L4	216 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	ZNF429	Q86V71	674 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	FAM89B	Q8N5H3	189 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	IL1F10	Q8WWZ1	152 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	YIPF6	Q96EC8	236 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	NICN1	Q9BSH3	213 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	IFI27L2	Q9H2X8	130 aa		11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.91	□□□□□ -0.5
MRPL55-231	ENST00000492170		A0A1W2PN81	502 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	OVOL1	O14753	267 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	RAB29	O14966	203 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	ST8SIA5	O15466	376 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	CHRNA7	P36544	502 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	NDP	Q00604	133 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	PLGLA	Q15195	96 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	C2orf76	Q3KRA6	126 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	HES5	Q5TA89	166 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	C6orf201	Q7Z4U5	140 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	TCTEX1D1	Q8N7M0	179 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	MINDY2	Q8NBR6	621 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	DCUN1D4	Q92564	292 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	URM1	Q9BTM9	101 aa	Known RBP	11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	FAAP24	Q9BTP7	215 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	SLC23A1	Q9UHI7	598 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	FOXA2	Q9Y261	457 aa	Predicted RBP	11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	SMAD5-AS1	Q9Y6J3	95 aa		11.9	□□□□□ -0.5
MRPL55-231	ENST00000492170	TMEM272	A0A1B0GTI8	110 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	OR5H14	A6NHG9	310 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	NOTO	A8MTQ0	251 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	RRH	O14718	337 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	CRIP2	P52943	208 aa	Predicted RBP	11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	TIMM50	Q3ZCQ8	353 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	SETD6	Q8TBK2	473 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	ABHD5	Q8WTS1	349 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	CENPO	Q9BU64	300 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	FBXL15	Q9H469	300 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	RNF167	Q9H6Y7	350 aa		11.89	□□□□□ -0.51
MRPL55-231	ENST00000492170	LOC100506127	A0A0U1RQW1	187 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	LINC01619	G3V211	115 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	SAP30	O75446	220 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	RBBP9	O75884	186 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	NAPSA	O96009	420 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	GSTP1	P09211	210 aa	Known RBP	11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	MC5R	P33032	325 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	PLA2G7	Q13093	441 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	RPL39P5	Q59GN2	51 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	C19orf54	Q5BKX5	351 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	PYHIN1	Q6K0P9	492 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	ZNF880	Q6PDB4	577 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	PTX4	Q96A99	478 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	TOLLIP	Q9H0E2	274 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	ALX4	Q9H161	411 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	GHITM	Q9H3K2	345 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	RIMS4	Q9H426	269 aa	Predicted RBP	11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	PLEKHJ1	Q9NW61	149 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	RNF150	Q9ULK6	438 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	HSF4	Q9ULV5	492 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	WASHC3	Q9Y3C0	194 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	FBXO7	Q9Y3I1	522 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	A3GALT2	U3KPV4	340 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	STAB2	Q8WWQ8	2551 aa		11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.88	□□□□□ -0.51
MRPL55-231	ENST00000492170	SORL1	Q92673	2214 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170		H0YJW9	148 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	C3orf84	H3BNL1	204 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170		H7C2Y5	167 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	ITGB1BP1	O14713	200 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	SOCS1	O15524	211 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	SOX15	O60248	233 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	LGALS1	P09382	135 aa	Known RBP	11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	CT45A6	P0DMU7	189 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	CT45A5	P0DMU8	189 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	CT45A7	P0DMV0	189 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	RAB6A	P20340	208 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	SDC2	P34741	201 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	SLURP1	P55000	103 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	TMEM50B	P56557	158 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	CX3CL1	P78423	397 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	SFXN4	Q6P4A7	337 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	OR13F1	Q8NGS4	319 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	EDARADD	Q8WWZ3	215 aa		11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	DLX4	Q92988	240 aa	Predicted RBP	11.87	□□□□□ -0.51
MRPL55-231	ENST00000492170	RAB22A	Q9UL26	194 aa		11.87	□□□□□ -0.51

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