RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C12orf4Q9NQ89 552 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 WASHC3Q9Y3C0 194 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 TPRKBQ9Y3C4 175 aa6.48□□□□□ -1.37
SMARCB1-207ENST00000491967 RYR3Q15413 4870 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 TRAV1-2A0A0B4J238 106 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 TRDCB7Z8K6 153 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 RGS10O43665 173 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ARL6IP5O75915 188 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 IGKV1-16P04430 117 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 CRYGBP07316 175 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 SCTP09683 121 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 SNRPBP14678 240 aaKnown RBP6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 CEACAM6P40199 344 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 PSMD7P51665 324 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 AQP4P55087 323 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 HLA-DRB3P79483 266 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 SSBP2P81877 361 aaPredicted RBP6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 FABP5Q01469 135 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 PSG5Q15238 335 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 P2RY14Q15391 338 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF260Q3ZCT1 412 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 PYHIN1Q6K0P9 492 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF429Q86V71 674 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF383Q8NA42 475 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 DCUN1D4Q92564 292 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ARHGAP5-AS1Q96IT6 56 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ABHD14BQ96IU4 210 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 MGLLQ99685 303 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 PECRQ9BY49 303 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 FBXL15Q9H469 300 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ACOT13Q9NPJ3 140 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 PARP11Q9NR21 331 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 OR1A1Q9P1Q5 309 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 KIAA1456Q9P272 454 aa6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 FOXA2Q9Y261 457 aaPredicted RBP6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 ZNF256Q9Y2P7 627 aaPredicted RBP6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 RRP15Q9Y3B9 282 aaKnown RBP6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 AK6Q9Y3D8 172 aaKnown RBP6.47□□□□□ -1.37
SMARCB1-207ENST00000491967 RAB27BO00194 218 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 ARPC1BO15143 372 aaKnown RBP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 SPDEFO95238 335 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 IGLV2-23P01705 113 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 LGALS1P09382 135 aaKnown RBP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 GALP22466 123 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 ECI1P42126 302 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 RANBP1P43487 201 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 SERPINB10P48595 397 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 RAB25P57735 213 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 LINC00205P59089 165 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 TMEM267Q0VDI3 215 aaPredicted RBP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 PLA2G7Q13093 441 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 TBCEQ15813 527 aaPredicted RBP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 RAB11BQ15907 218 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 SSX1Q16384 188 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 SRSF7Q16629 238 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 MRGPRG-AS1Q2M3A8 158 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 ACSM6Q6P461 480 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 GLDNQ6ZMI3 551 aaPredicted RBP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 Q6ZS49 121 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 PDPNQ86YL7 162 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 OR56B1Q8NGI3 324 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 DLX4Q92988 240 aaPredicted RBP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 RHOVQ96L33 236 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 PRR25Q96S07 402 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 CABLES2Q9BTV7 478 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 CHMP1AQ9HD42 196 aaPredicted RBP6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 RAB22AQ9UL26 194 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 U3KQK5 164 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 V9GY05 133 aa6.46□□□□□ -1.38
SMARCB1-207ENST00000491967 TRBV6-7A0A0A0MS04 114 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 TMEM272A0A1B0GTI8 110 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 SHISA3A0PJX4 238 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 IFITM5A6NNB3 132 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 MFNGO00587 321 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 OVOL1O14753 267 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 DENRO43583 198 aaKnown RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 HSPB1P04792 205 aaKnown RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 TFAP2AP05549 437 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 RAB6AP20340 208 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 CALRP27797 417 aaKnown RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 LGALS7P47929 136 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 VEGFCP49767 419 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 CLDN12P56749 244 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 PPP1R27Q86WC6 154 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 DRAXINQ8NBI3 349 aaPredicted RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 OR4A4PQ8NGN8 299 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 TSNAXQ99598 290 aaKnown RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 CMSS1Q9BQ75 279 aaKnown RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 ALX4Q9H161 411 aaPredicted RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 SLA2Q9H6Q3 261 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 PLGRKTQ9HBL7 147 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 RDH8Q9NYR8 311 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 METTL1Q9UBP6 276 aaKnown RBP6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 RNF150Q9ULK6 438 aa6.45□□□□□ -1.38
SMARCB1-207ENST00000491967 IGHV4OR15-8A0A075B7B6 117 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 A0A087WW49 117 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 TRDV1A0A1B0GX56 115 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms