RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 B9D2Q9BPU9 175 aa21.6■■□□□ 1.05
HOXB3-211ENST00000490677 RAB9AP51151 201 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 GNB1P62873 340 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 CX3CL1P78423 397 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 MOGAT2Q3SYC2 334 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 HES5Q5TA89 166 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 CD200R1LQ6Q8B3 271 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 EDARADDQ8WWZ3 215 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 CMSS1Q9BQ75 279 aaKnown RBP21.59■■□□□ 1.05
HOXB3-211ENST00000490677 TOLLIPQ9H0E2 274 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 KIAA1456Q9P272 454 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 WASHC3Q9Y3C0 194 aa21.59■■□□□ 1.05
HOXB3-211ENST00000490677 MC5RP33032 325 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 OR10A3P58181 314 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 VAX1Q5SQQ9 334 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 C9orf66Q5T8R8 295 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 ZNF660Q6AZW8 331 aaPredicted RBP21.58■■□□□ 1.05
HOXB3-211ENST00000490677 ZNF367Q7RTV3 350 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 ZNF383Q8NA42 475 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 OR56B1Q8NGI3 324 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 RNF150Q9ULK6 438 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 GAB2Q9UQC2 676 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 VSIG4Q9Y279 399 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 LSM4Q9Y4Z0 139 aaKnown RBP21.58■■□□□ 1.05
HOXB3-211ENST00000490677 NUBP2Q9Y5Y2 271 aa21.58■■□□□ 1.05
HOXB3-211ENST00000490677 DENRO43583 198 aaKnown RBP21.57■■□□□ 1.04
HOXB3-211ENST00000490677 DRAXINQ8NBI3 349 aaPredicted RBP21.57■■□□□ 1.04
HOXB3-211ENST00000490677 CNBD2Q96M20 576 aa21.57■■□□□ 1.04
HOXB3-211ENST00000490677 NDUFB11Q9NX14 153 aa21.57■■□□□ 1.04
HOXB3-211ENST00000490677 TRAV1-2A0A0B4J238 106 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 SEC14L6B5MCN3 397 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 TRDCB7Z8K6 153 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 HSPA12AO43301 675 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 RAMP3O60896 148 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 RBBP9O75884 186 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 IGKV1-16P04430 117 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 RNF5Q99942 180 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 VCX3BQ9H321 246 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 RDH8Q9NYR8 311 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 RAB22AQ9UL26 194 aa21.56■■□□□ 1.04
HOXB3-211ENST00000490677 HSPA13P48723 471 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 PSMD7P51665 324 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 PSG5Q15238 335 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 ECSCRQ19T08 205 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 TMEM65Q6PI78 240 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 NR2C2APQ86WQ0 139 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 OR1N2Q8NGR9 330 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 OR5B12Q96R08 314 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 TPSG1Q9NRR2 321 aa21.55■■□□□ 1.04
HOXB3-211ENST00000490677 ZMAT5Q9UDW3 170 aaKnown RBP21.55■■□□□ 1.04
HOXB3-211ENST00000490677 HUWE1Q7Z6Z7 4374 aaKnown RBP21.55■■□□□ 1.04
HOXB3-211ENST00000490677 TENM3Q9P273 2699 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 TNCP24821 2201 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 H7C2Y5 167 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 RAB27BO00194 218 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 MFNGO00587 321 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 ZNF616Q08AN1 781 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 CASTOR1Q8WTX7 329 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 PRR25Q96S07 402 aa21.54■■□□□ 1.04
HOXB3-211ENST00000490677 ALX4Q9H161 411 aaPredicted RBP21.54■■□□□ 1.04
HOXB3-211ENST00000490677 A0A1W2PN81 502 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 IFITM5A6NNB3 132 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 FCGR3AP08637 254 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 GSTP1P09211 210 aaKnown RBP21.53■■□□□ 1.04
HOXB3-211ENST00000490677 CD3GP09693 182 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 CHRNA7P36544 502 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 SSBP2P81877 361 aaPredicted RBP21.53■■□□□ 1.04
HOXB3-211ENST00000490677 CD69Q07108 199 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 IGSF11Q5DX21 431 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 OR4A4PQ8NGN8 299 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 C5orf30Q96GV9 206 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 CABLES2Q9BTV7 478 aa21.53■■□□□ 1.04
HOXB3-211ENST00000490677 FOXA2Q9Y261 457 aaPredicted RBP21.53■■□□□ 1.04
HOXB3-211ENST00000490677 TRDV1A0A1B0GX56 115 aa21.52■■□□□ 1.04
HOXB3-211ENST00000490677 OR8U8P0C7N1 319 aa21.52■■□□□ 1.04
HOXB3-211ENST00000490677 TCTEX1D1Q8N7M0 179 aa21.52■■□□□ 1.04
HOXB3-211ENST00000490677 RAB3CQ96E17 227 aa21.52■■□□□ 1.04
HOXB3-211ENST00000490677 FAM103A1Q9BTL3 118 aaKnown RBP21.52■■□□□ 1.04
HOXB3-211ENST00000490677 BLOC1S6Q9UL45 172 aa21.52■■□□□ 1.04
HOXB3-211ENST00000490677 RAB26Q9ULW5 256 aa21.52■■□□□ 1.04
HOXB3-211ENST00000490677 A0A0B4J203 849 aa21.51■■□□□ 1.03
HOXB3-211ENST00000490677 FABP7O15540 132 aa21.51■■□□□ 1.03
HOXB3-211ENST00000490677 ZNF260Q3ZCT1 412 aa21.51■■□□□ 1.03
HOXB3-211ENST00000490677 ZNF562Q6V9R5 426 aa21.51■■□□□ 1.03
HOXB3-211ENST00000490677 OR10R2Q8NGX6 335 aa21.51■■□□□ 1.03
HOXB3-211ENST00000490677 METTL1Q9UBP6 276 aaKnown RBP21.51■■□□□ 1.03
HOXB3-211ENST00000490677 ZNF221Q9UK13 617 aa21.51■■□□□ 1.03
HOXB3-211ENST00000490677 A3GALT2U3KPV4 340 aa21.51■■□□□ 1.03
HOXB3-211ENST00000490677 TRBV6-7A0A0A0MS04 114 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 SPDEFO95238 335 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 TFAP2AP05549 437 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 GSTT2P0CG29 244 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 GSTT2BP0CG30 244 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 GNB3P16520 340 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 ECI1P42126 302 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 DCTN2Q13561 401 aaKnown RBP21.5■■□□□ 1.03
HOXB3-211ENST00000490677 PLGLAQ15195 96 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 AKIRIN2Q53H80 203 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 PPP1R27Q86WC6 154 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 PDPNQ86YL7 162 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms