RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FBXL15Q9H469 300 aa9.16□□□□□ -0.94
SRSF4-204ENST00000489898 VCX3AQ9NNX9 186 aa9.16□□□□□ -0.94
SRSF4-204ENST00000489898 RAB9BQ9NP90 201 aa9.16□□□□□ -0.94
SRSF4-204ENST00000489898 SCN3BQ9NY72 215 aa9.16□□□□□ -0.94
SRSF4-204ENST00000489898 TPRKBQ9Y3C4 175 aa9.16□□□□□ -0.94
SRSF4-204ENST00000489898 LSM4Q9Y4Z0 139 aaKnown RBP9.16□□□□□ -0.94
SRSF4-204ENST00000489898 TRAV1-2A0A0B4J238 106 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 OR5H14A6NHG9 310 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 H3BUI4 141 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 ARPC1BO15143 372 aaKnown RBP9.15□□□□□ -0.94
SRSF4-204ENST00000489898 CRYGBP07316 175 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 FCGR3AP08637 254 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 HSMCR30P0CW71 290 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 SLC35B1P78383 322 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 TRAM1Q15629 374 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 RAB11BQ15907 218 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 C2orf76Q3KRA6 126 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 HES5Q5TA89 166 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 UBE2UQ5VVX9 321 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 OR8U1Q8NH10 309 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 CASTOR1Q8WTX7 329 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 RASL11BQ9BPW5 248 aa9.15□□□□□ -0.94
SRSF4-204ENST00000489898 MRPS26Q9BYN8 205 aaKnown RBP9.15□□□□□ -0.94
SRSF4-204ENST00000489898 ALX4Q9H161 411 aaPredicted RBP9.15□□□□□ -0.94
SRSF4-204ENST00000489898 TRDV1A0A1B0GX56 115 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 IFITM5A6NNB3 132 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 RRHO14718 337 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 RBMXL2O75526 392 aaKnown RBP9.14□□□□□ -0.95
SRSF4-204ENST00000489898 ARL6IP5O75915 188 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 GABARAPL2P60520 117 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 IGSF11Q5DX21 431 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 CXorf66Q5JRM2 361 aaPredicted RBP9.14□□□□□ -0.95
SRSF4-204ENST00000489898 DDB2Q92466 427 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 YTHDF1Q9BYJ9 559 aaKnown RBP9.14□□□□□ -0.95
SRSF4-204ENST00000489898 PLGRKTQ9HBL7 147 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 PARP11Q9NR21 331 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 PLEKHJ1Q9NW61 149 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 KCNIP1Q9NZI2 227 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 PIPOXQ9P0Z9 390 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 STEAP1Q9UHE8 339 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 NUBP2Q9Y5Y2 271 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 WSB1Q9Y6I7 421 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 V9GY05 133 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 TENM2Q9NT68 2774 aa9.14□□□□□ -0.95
SRSF4-204ENST00000489898 A0A087WXM4 84 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 TRBV6-7A0A0A0MS04 114 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 TRAV41A0A0B4J266 112 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 NUDT19A8MXV4 375 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 RAB29O14966 203 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 RGS11O94810 467 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 IGLV2-14P01704 120 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 HIST1H1DP16402 221 aaKnown RBP9.13□□□□□ -0.95
SRSF4-204ENST00000489898 VDAC1P21796 283 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 CX3CL1P78423 397 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 KCTD21Q4G0X4 260 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 Q6ZS49 121 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 SPARTQ8N0X7 666 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 DRAXINQ8NBI3 349 aaPredicted RBP9.13□□□□□ -0.95
SRSF4-204ENST00000489898 TSPAN14Q8NG11 270 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 MAFIPQ8WZ33 124 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 UBE2E2Q96LR5 201 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 FAM103A1Q9BTL3 118 aaKnown RBP9.13□□□□□ -0.95
SRSF4-204ENST00000489898 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.13□□□□□ -0.95
SRSF4-204ENST00000489898 RDH8Q9NYR8 311 aa9.13□□□□□ -0.95
SRSF4-204ENST00000489898 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 SMIM30A4D0T7 59 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 DIRAS3O95661 229 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 EIF4EBP1Q13541 118 aaPredicted RBP9.12□□□□□ -0.95
SRSF4-204ENST00000489898 PSG5Q15238 335 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 CMSS1Q9BQ75 279 aaKnown RBP9.12□□□□□ -0.95
SRSF4-204ENST00000489898 CHCHD6Q9BRQ6 235 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 URM1Q9BTM9 101 aaKnown RBP9.12□□□□□ -0.95
SRSF4-204ENST00000489898 CCDC90BQ9GZT6 254 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 RIMS4Q9H426 269 aaPredicted RBP9.12□□□□□ -0.95
SRSF4-204ENST00000489898 SDHAF2Q9NX18 166 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 ZNF230Q9UIE0 474 aaPredicted RBP9.12□□□□□ -0.95
SRSF4-204ENST00000489898 WASHC3Q9Y3C0 194 aa9.12□□□□□ -0.95
SRSF4-204ENST00000489898 EPPK1P58107 5090 aaKnown RBP9.11□□□□□ -0.95
SRSF4-204ENST00000489898 IGHV4OR15-8A0A075B7B6 117 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 A0A087WW49 117 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 SRRM4A7MD48 611 aaKnown RBP9.11□□□□□ -0.95
SRSF4-204ENST00000489898 LINC00473A8K010 186 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 TRDCB7Z8K6 153 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 FABP7O15540 132 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 SSX5O60225 188 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 SPDEFO95238 335 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 CA2P00918 260 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 GSTT2P0CG29 244 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 GSTT2BP0CG30 244 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 GNB3P16520 340 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 RAB6AP20340 208 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 GALP22466 123 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 ZBTB25P24278 435 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 FGF9P31371 208 aaPredicted RBP9.11□□□□□ -0.95
SRSF4-204ENST00000489898 RAB9AP51151 201 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 PJVKQ0ZLH3 352 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 ECSCRQ19T08 205 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 C22orf42Q6IC83 251 aa9.11□□□□□ -0.95
SRSF4-204ENST00000489898 OR11H1Q8NG94 326 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms