RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 A6NJ64 397 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 H0YJW9 148 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 ACTBP60709 375 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 PITPNAQ00169 270 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 TMEM69Q5SWH9 247 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 FAM71F2Q6NXP2 309 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 ZNF383Q8NA42 475 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 KCTD12Q96CX2 325 aaKnown RBP9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 HSPB9Q9BQS6 159 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 TOLLIPQ9H0E2 274 aa9.71□□□□□ -0.86
SMARCD3-213ENST00000489503 CMYA5Q8N3K9 4069 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 IGKV1D-13A0A0B4J2D9 117 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 A0A1W2PRX2 142 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 H7C2Y5 167 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 XRCC3O43542 346 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 TMEM127O75204 238 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 IGKV1-13P0DP09 117 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 ELK1P19419 428 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 RORCP51449 518 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 SRSF7Q16629 238 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 NSUN5P1Q3KNT7 163 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 PRR31Q5SQ13 230 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 SLC35E3Q7Z769 313 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 ZNF329Q86UD4 541 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 FAM71E2Q8N5Q1 922 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 BEST4Q8NFU0 473 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 OR5AU1Q8NGC0 362 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 SNAPC3Q92966 411 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 S100A16Q96FQ6 103 aaKnown RBP9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 CITED2Q99967 270 aaPredicted RBP9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 SDHAF2Q9NX18 166 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 ANXA10Q9UJ72 324 aa9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 RBM7Q9Y580 266 aaKnown RBP9.7□□□□□ -0.86
SMARCD3-213ENST00000489503 OR5H14A6NHG9 310 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 M0QZ24 198 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 DIRAS3O95661 229 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 ARPC4P59998 168 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 RNASE12Q5GAN4 147 aaKnown RBP9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 CNIH2Q6PI25 160 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 CENPVQ7Z7K6 275 aaPredicted RBP9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 HOGA1Q86XE5 327 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 SNX29P2Q8IUI4 249 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 RASL11BQ9BPW5 248 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 LIN7CQ9NUP9 197 aaKnown RBP9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 MRPS7Q9Y2R9 242 aaKnown RBP9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 WASHC3Q9Y3C0 194 aa9.69□□□□□ -0.86
SMARCD3-213ENST00000489503 PSMB11A5LHX3 300 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 FAM25AB3EWG3 89 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 FAM25CB3EWG5 89 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 FAM25GB3EWG6 89 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 NBR2O15453 112 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 IGHG2P01859 326 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 APOA1P02647 267 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 IGKV1-16P04430 117 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 ZNF182P17025 639 aaPredicted RBP9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 C2orf68Q2NKX9 166 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 OR5AN1Q8NGI8 311 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 FAM110DQ8TAY7 271 aaPredicted RBP9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 ACOT12Q8WYK0 555 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 FBXL15Q9H469 300 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 IFT46Q9NQC8 304 aa9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 ZNF107Q9UII5 783 aaPredicted RBP9.68□□□□□ -0.86
SMARCD3-213ENST00000489503 PLXNB1O43157 2135 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 H3BMQ9 156 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 HLA-DQB1P01920 261 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 APOA2P02652 100 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 CSF1P09603 554 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 AADACP22760 399 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 SOX6P35712 828 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 NDPQ00604 133 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 C5orf64Q2M2E5 130 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 STPG2Q8N412 459 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 OR8H1Q8NGG4 311 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 RAB2BQ8WUD1 216 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 ISOC1Q96CN7 298 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 GPHA2Q96T91 129 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 MIXL1Q9H2W2 232 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 TPSG1Q9NRR2 321 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 SLC35D1Q9NTN3 355 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 SCOCQ9UIL1 159 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 OR2W1Q9Y3N9 320 aa9.67□□□□□ -0.86
SMARCD3-213ENST00000489503 LINC00473A8K010 186 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 TUSC2O75896 110 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 NDUFA3O95167 84 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 CTXN2P0C2S0 81 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 FCGR2CP31995 323 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 PRSS3P35030 304 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 LUMP51884 338 aaPredicted RBP9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 FXYD4P59646 89 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 OR2B11Q5JQS5 317 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 MZT2AQ6P582 158 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 FOXRED2Q8IWF2 684 aa9.66□□□□□ -0.86
SMARCD3-213ENST00000489503 LAX1Q8IWV1 398 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms