RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 DRAM1Q8N682 238 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 TMEM252Q8N6L7 170 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 BPIFCQ8NFQ6 507 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 Q8TCH9 128 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 S100PBPQ96BU1 408 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 SNX22Q96L94 193 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 HSD17B10Q99714 261 aaKnown RBP7.07□□□□□ -1.28
VTI1A-207ENST00000489357 PBDC1Q9BVG4 233 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 FAM234AQ9H0X4 552 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 OR1A1Q9P1Q5 309 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 Q9UFV3 132 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 IL19Q9UHD0 177 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 JPT1Q9UK76 154 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 GAB2Q9UQC2 676 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 RNF115Q9Y4L5 304 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 U3KQE9 123 aa7.07□□□□□ -1.28
VTI1A-207ENST00000489357 ADGRG4Q8IZF6 3080 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 CENPEQ02224 2701 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 VSTM5A8MXK1 200 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 C12orf77C9JDV5 145 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 KCNAB3O43448 404 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF737O75373 536 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 LHBP01229 141 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 HBZP02008 142 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 APOC3P02656 99 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 CD5P06127 495 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 OR8U8P0C7N1 319 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 PRDX2P32119 198 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 SULT1A1P50225 295 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 HBG1P69891 147 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 HBG2P69892 147 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 TFF3Q07654 80 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 EIF4EBP1Q13541 118 aaPredicted RBP7.06□□□□□ -1.28
VTI1A-207ENST00000489357 MST1LQ2TV78 715 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 KRBOX4Q5JUW0 171 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 C22orf34Q6ZV56 151 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF561Q8N587 486 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 OR2Z1Q8NG97 314 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 OR51H1Q8NH63 302 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 RNASE11Q8TAA1 199 aaKnown RBP7.06□□□□□ -1.28
VTI1A-207ENST00000489357 FAM222BQ8WU58 562 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 LRRC29Q8WV35 223 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 TMEM171Q8WVE6 324 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 RND1Q92730 232 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 ATP5SQ99766 215 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 UQCC1Q9NVA1 299 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 OR6C3Q9NZP0 311 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 JKAMPQ9P055 326 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 OR14J1Q9UGF5 321 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 NBPF19A0A087WUL8 3843 aa7.06□□□□□ -1.28
VTI1A-207ENST00000489357 SCO2A0A1W2PP80 73 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 KIAA1324LA8MWY0 1029 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 C16orf97H3BN30 126 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 M0R1B8 84 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 RBFOX2O43251 390 aaKnown RBP eCLIP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 TXNL1O43396 289 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 SYNGR2O43760 224 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 SSSCA1O60232 199 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 SOX15O60248 233 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 YPEL1O60688 119 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 TSPAN15O95858 294 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 CD55P08174 381 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 OR8U9P0C7N5 309 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 PSG2P11465 335 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 IGFBP2P18065 325 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 CHRNB4P30926 498 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 KIR2DS2P43631 304 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 LPAR6P43657 344 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 GABRA2P47869 451 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 AKR1C2P52895 323 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 RAB2AP61019 212 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 POLR2GP62487 172 aaKnown RBP eCLIP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 NHLH2Q02577 135 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 COL10A1Q03692 680 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 PEA15Q15121 130 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 FBXL19-AS1Q494R0 122 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 CXorf66Q5JRM2 361 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 FAM209AQ5JX71 171 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 Q6ZRG5 221 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 GCSAMQ8N6F7 178 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 OR8U1Q8NH10 309 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 GPR146Q96CH1 333 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 LRRC46Q96FV0 321 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 COQ2Q96H96 371 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 NARS2Q96I59 477 aaKnown RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 CIB3Q96Q77 187 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 YPEL2Q96QA6 119 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 PSMG3Q9BT73 122 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 C1QTNF6Q9BXI9 259 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 NKX6-2Q9C056 277 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 UNKLQ9H9P5 680 aaKnown RBP7.05□□□□□ -1.28
VTI1A-207ENST00000489357 MSL2Q9HCI7 577 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 NGBQ9NPG2 151 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 KCNS2Q9ULS6 477 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 KPTNQ9Y664 436 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 ITPR2Q14571 2701 aa7.05□□□□□ -1.28
VTI1A-207ENST00000489357 CRYBG3Q68DQ2 2970 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 TRAV1-1A0A0B4J248 108 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 ODAMA1E959 279 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms