RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ELANEP08246 267 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 GSTT2P0CG29 244 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 GSTT2BP0CG30 244 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 SLC6A1P30531 599 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 LINC00205P59089 165 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 CXorf66Q5JRM2 361 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-217ENST00000489072 REC114Q7Z4M0 266 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 DRAXINQ8NBI3 349 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-217ENST00000489072 DUX3Q96PT4 197 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 P2RX4Q99571 388 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 CABLES2Q9BTV7 478 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 ATG5Q9H1Y0 275 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 OR51J1Q9H342 316 aa19.56■□□□□ 0.72
HMGN1-217ENST00000489072 AURKAIP1Q9NWT8 199 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-217ENST00000489072 ELF5Q9UKW6 265 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-217ENST00000489072 RRP15Q9Y3B9 282 aaKnown RBP19.56■□□□□ 0.72
HMGN1-217ENST00000489072 G3V318 75 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 BET1O15155 118 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 MC5RP33032 325 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 MYCNOSP40205 109 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 LIN54Q6MZP7 749 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 TPRA1Q86W33 373 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 RAX2Q96IS3 184 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 FBXL15Q9H469 300 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 RNF167Q9H6Y7 350 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 PARP11Q9NR21 331 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 KIAA1456Q9P272 454 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 WASHC3Q9Y3C0 194 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 WSB1Q9Y6I7 421 aa19.55■□□□□ 0.72
HMGN1-217ENST00000489072 PSMB8P28062 276 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 PPIFP30405 207 aaKnown RBP19.54■□□□□ 0.72
HMGN1-217ENST00000489072 SERPINB10P48595 397 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 NDPQ00604 133 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 KIR2DS1Q14954 304 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 KCTD21Q4G0X4 260 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 ZNF383Q8NA42 475 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 CHCHD6Q9BRQ6 235 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 DAPK2Q9UIK4 370 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 ZNF221Q9UK13 617 aa19.54■□□□□ 0.72
HMGN1-217ENST00000489072 TRBV6-7A0A0A0MS04 114 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 H7C2Y5 167 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 RRHO14718 337 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 CLEC2LP0C7M8 214 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 SNRPBP14678 240 aaKnown RBP19.53■□□□□ 0.72
HMGN1-217ENST00000489072 SDC2P34741 201 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 CDX1P47902 265 aaPredicted RBP19.53■□□□□ 0.72
HMGN1-217ENST00000489072 ARFRP1Q13795 201 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 NEDD8Q15843 81 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 DEFB136Q30KP8 78 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 FBXO7Q9Y3I1 522 aa19.53■□□□□ 0.72
HMGN1-217ENST00000489072 IGKV1D-8A0A087WSZ0 117 aa19.52■□□□□ 0.72
HMGN1-217ENST00000489072 RBBP9O75884 186 aa19.52■□□□□ 0.72
HMGN1-217ENST00000489072 GSTP1P09211 210 aaKnown RBP19.52■□□□□ 0.72
HMGN1-217ENST00000489072 OR5H8P0DN80 308 aa19.52■□□□□ 0.72
HMGN1-217ENST00000489072 CDNFQ49AH0 187 aa19.52■□□□□ 0.72
HMGN1-217ENST00000489072 SFXN4Q6P4A7 337 aa19.52■□□□□ 0.72
HMGN1-217ENST00000489072 OR10J5Q8NHC4 309 aa19.52■□□□□ 0.72
HMGN1-217ENST00000489072 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.52■□□□□ 0.72
HMGN1-217ENST00000489072 CCL24O00175 119 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 FCN1O00602 326 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 DUS4LO95620 317 aaKnown RBP19.51■□□□□ 0.71
HMGN1-217ENST00000489072 DIRAS3O95661 229 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 IGKV1-16P04430 117 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 TFAP2AP05549 437 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 OR8U9P0C7N5 309 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 MXD1Q05195 221 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 Q6ZS49 121 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 OR8U1Q8NH10 309 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 LGALS14Q8TCE9 139 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 MYOZ3Q8TDC0 251 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 C5orf30Q96GV9 206 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 KLK15Q9H2R5 256 aa19.51■□□□□ 0.71
HMGN1-217ENST00000489072 TRAV41A0A0B4J266 112 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 LOC100506127A0A0U1RQW1 187 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 M0R1X1 148 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 CD36P16671 472 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 TALDO1P37837 337 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 KRTAP10-11P60412 298 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 SRSF7Q16629 238 aaKnown RBP eCLIP19.5■□□□□ 0.71
HMGN1-217ENST00000489072 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-217ENST00000489072 MRAPQ8TCY5 172 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 RNF5Q99942 180 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 OR2D2Q9H210 308 aa19.5■□□□□ 0.71
HMGN1-217ENST00000489072 IGLV1-40P01703 118 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 CX3CL1P78423 397 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 KIAA0141Q14154 515 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-217ENST00000489072 PLGLAQ15195 96 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 PSG5Q15238 335 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 C19orf54Q5BKX5 351 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 MINDY2Q8NBR6 621 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 CENPOQ9BU64 300 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 SDHAF2Q9NX18 166 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 GAB2Q9UQC2 676 aa19.49■□□□□ 0.71
HMGN1-217ENST00000489072 EGR2P11161 476 aaPredicted RBP19.48■□□□□ 0.71
HMGN1-217ENST00000489072 DTYMKP23919 212 aa19.48■□□□□ 0.71
HMGN1-217ENST00000489072 HOXD3P31249 432 aaPredicted RBP19.48■□□□□ 0.71
HMGN1-217ENST00000489072 CRIP2P52943 208 aaPredicted RBP19.48■□□□□ 0.71
HMGN1-217ENST00000489072 ARL6IP1Q15041 203 aa19.48■□□□□ 0.71
HMGN1-217ENST00000489072 HACD4Q5VWC8 232 aa19.48■□□□□ 0.71
HMGN1-217ENST00000489072 ZNF660Q6AZW8 331 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms