RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 GSTP1P09211 210 aaKnown RBP17.93■□□□□ 0.46
COL9A3-213ENST00000489045 MYL9P24844 172 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 PLGLAQ15195 96 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 MOGAT2Q3SYC2 334 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 OR5AN1Q8NGI8 311 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 PTX4Q96A99 478 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 RAB3CQ96E17 227 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 GNB4Q9HAV0 340 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 KCNK7Q9Y2U2 307 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 FBXO7Q9Y3I1 522 aa17.93■□□□□ 0.46
COL9A3-213ENST00000489045 IFITM5A6NNB3 132 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 RBBP9O75884 186 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 CD3GP09693 182 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 LUMP51884 338 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-213ENST00000489045 GABARAPL2P60520 117 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 MRPS15P82914 257 aaKnown RBP17.92■□□□□ 0.46
COL9A3-213ENST00000489045 FHL3Q13643 280 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 KIAA0141Q14154 515 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-213ENST00000489045 ECSCRQ19T08 205 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 ZNF491Q8N8L2 437 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 DRAXINQ8NBI3 349 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-213ENST00000489045 UBE2E2Q96LR5 201 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 RDH8Q9NYR8 311 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 ZNF221Q9UK13 617 aa17.92■□□□□ 0.46
COL9A3-213ENST00000489045 TRDV1A0A1B0GX56 115 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 PROP1O75360 226 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 ATP6V1G2O95670 118 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 RAB3BP20337 219 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 MINDY2Q8NBR6 621 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 OR11H1Q8NG94 326 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 OR4A4PQ8NGN8 299 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 VSIG4Q9Y279 399 aa17.91■□□□□ 0.46
COL9A3-213ENST00000489045 A0A0B4J203 849 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 FCN1O00602 326 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 FCGR3AP08637 254 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 CRIP2P52943 208 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-213ENST00000489045 LINC00205P59089 165 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 CX3CL1P78423 397 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 DGCR2P98153 550 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 C19orf54Q5BKX5 351 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 ZNF660Q6AZW8 331 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-213ENST00000489045 C22orf42Q6IC83 251 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 OR10R2Q8NGX6 335 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 OR5B12Q96R08 314 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 A3GALT2U3KPV4 340 aa17.9■□□□□ 0.46
COL9A3-213ENST00000489045 A0A075B6Q4 140 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 A0A1W2PN81 502 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 I3L521 148 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 MFNGO00587 321 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 FABP7O15540 132 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 TFAP2AP05549 437 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 GNB3P16520 340 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 RAB6AP20340 208 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 GADD45AP24522 165 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 CHRNA7P36544 502 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 RAB9AP51151 201 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 C9orf66Q5T8R8 295 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 ZNF383Q8NA42 475 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 ABHD5Q8WTS1 349 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 RNF5Q99942 180 aa17.89■□□□□ 0.45
COL9A3-213ENST00000489045 METTL1Q9UBP6 276 aaKnown RBP17.89■□□□□ 0.45
COL9A3-213ENST00000489045 ZMAT5Q9UDW3 170 aaKnown RBP17.89■□□□□ 0.45
COL9A3-213ENST00000489045 SEC14L6B5MCN3 397 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 RAB27BO00194 218 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 BET1O15155 118 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 SOX15O60248 233 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 MRPS14O60783 128 aaKnown RBP17.88■□□□□ 0.45
COL9A3-213ENST00000489045 IGKV1-16P04430 117 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 GALP22466 123 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 SERPINB10P48595 397 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 GNB1P62873 340 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 RUNX1Q01196 453 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 PSG5Q15238 335 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 IGSF11Q5DX21 431 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 UBE2UQ5VVX9 321 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 NR2C2APQ86WQ0 139 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 CLCC1Q96S66 551 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 CABLES2Q9BTV7 478 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 TOLLIPQ9H0E2 274 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 GAB2Q9UQC2 676 aa17.88■□□□□ 0.45
COL9A3-213ENST00000489045 FOXA2Q9Y261 457 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-213ENST00000489045 SMIM30A4D0T7 59 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 APOA2P02652 100 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 GSTT2P0CG29 244 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 GSTT2BP0CG30 244 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 EGR2P11161 476 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-213ENST00000489045 SNRPBP14678 240 aaKnown RBP17.87■□□□□ 0.45
COL9A3-213ENST00000489045 HIST1H1DP16402 221 aaKnown RBP17.87■□□□□ 0.45
COL9A3-213ENST00000489045 ASPHD1Q5U4P2 390 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 PDPNQ86YL7 162 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-213ENST00000489045 OR1N2Q8NGR9 330 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 MAFIPQ8WZ33 124 aa17.87■□□□□ 0.45
COL9A3-213ENST00000489045 ZNF230Q9UIE0 474 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-213ENST00000489045 M0R1X1 148 aa17.86■□□□□ 0.45
COL9A3-213ENST00000489045 RAMP3O60896 148 aa17.86■□□□□ 0.45
COL9A3-213ENST00000489045 OR8U8P0C7N1 319 aa17.86■□□□□ 0.45
COL9A3-213ENST00000489045 PSMB9P28065 219 aa17.86■□□□□ 0.45
COL9A3-213ENST00000489045 RPS16P62249 146 aaKnown RBP17.86■□□□□ 0.45
COL9A3-213ENST00000489045 ZNF616Q08AN1 781 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms