RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TRIM64CA6NLI5 447 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 RBBP9O75884 186 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 APOA2P02652 100 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 TFAP2AP05549 437 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 OR8U9P0C7N5 309 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 CT45A6P0DMU7 189 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 CT45A5P0DMU8 189 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 CT45A7P0DMV0 189 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 CBX3Q13185 183 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 PLGLAQ15195 96 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 ZNF260Q3ZCT1 412 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 GLDNQ6ZMI3 551 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-218ENST00000489037 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 STPG2Q8N412 459 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 FAM71E2Q8N5Q1 922 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 OR8U1Q8NH10 309 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 S100A16Q96FQ6 103 aaKnown RBP11.29□□□□□ -0.6
BRCA1-218ENST00000489037 RNF5Q99942 180 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
BRCA1-218ENST00000489037 ELF5Q9UKW6 265 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-218ENST00000489037 H0YJW9 148 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 M0R1X1 148 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 OR5H8P0DN80 308 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 VDAC1P21796 283 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 RPS19P39019 145 aaKnown RBP11.28□□□□□ -0.6
BRCA1-218ENST00000489037 LIN54Q6MZP7 749 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 NUDCD2Q8WVJ2 157 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 FUNDC2Q9BWH2 189 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 ZFP57Q9NU63 452 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 GAB2Q9UQC2 676 aa11.28□□□□□ -0.6
BRCA1-218ENST00000489037 PF4P02776 101 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 TGFBR1P36897 503 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 TAGLNQ01995 201 aaKnown RBP11.27□□□□□ -0.61
BRCA1-218ENST00000489037 C5orf64Q2M2E5 130 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 CNIH2Q6PI25 160 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 C10orf99Q6UWK7 81 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 PDPNQ86YL7 162 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 DRAXINQ8NBI3 349 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-218ENST00000489037 NPBQ8NG41 125 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 OR13F1Q8NGS4 319 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 SLC25A38Q96DW6 304 aa11.27□□□□□ -0.61
BRCA1-218ENST00000489037 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
BRCA1-218ENST00000489037 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 CMYA5Q8N3K9 4069 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 LINC01548A6NM66 108 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 RRHO14718 337 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 HLA-DRB1P01911 266 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 CNTFRP26992 372 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 CBX5P45973 191 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 ARPC4P59998 168 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 RPS16P62249 146 aaKnown RBP11.26□□□□□ -0.61
BRCA1-218ENST00000489037 TCTEX1D4Q5JR98 221 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 CXorf66Q5JRM2 361 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-218ENST00000489037 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 H1FOOQ8IZA3 346 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-218ENST00000489037 FLYWCH2Q96CP2 140 aaKnown RBP11.26□□□□□ -0.61
BRCA1-218ENST00000489037 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
BRCA1-218ENST00000489037 RBMXL1Q96E39 390 aaKnown RBP11.26□□□□□ -0.61
BRCA1-218ENST00000489037 RITA1Q96K30 269 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 MRPS26Q9BYN8 205 aaKnown RBP11.26□□□□□ -0.61
BRCA1-218ENST00000489037 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 ANXA10Q9UJ72 324 aa11.26□□□□□ -0.61
BRCA1-218ENST00000489037 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 NUDT19A8MXV4 375 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 SLC22A5O76082 557 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 NDUFA3O95167 84 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 IGF1P05019 195 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 RRASP10301 218 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 CD33P20138 364 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 THBS3P49746 956 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 LUMP51884 338 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-218ENST00000489037 VBP1P61758 197 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 SAMD12Q8N8I0 201 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 ZNF383Q8NA42 475 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 SLC25A46Q96AG3 418 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 OR51J1Q9H342 316 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 AUNIPQ9H7T9 357 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 PARP11Q9NR21 331 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 SDHAF2Q9NX18 166 aa11.25□□□□□ -0.61
BRCA1-218ENST00000489037 VWFP04275 2813 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 SMIM31A0A1B0GVY4 71 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 J3QRK9 145 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 XRCC3O43542 346 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 SSX5O60225 188 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 PROP1O75360 226 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 SPDEFO95238 335 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 ELANEP08246 267 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 SLC6A1P30531 599 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 NCS1P62166 190 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 RPL23AP62750 156 aaKnown RBP11.24□□□□□ -0.61
BRCA1-218ENST00000489037 DEFA6Q01524 100 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 FOXE3Q13461 319 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 TMEM69Q5SWH9 247 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms