RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PROP1O75360 226 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 SNRPBP14678 240 aaKnown RBP9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 RAB9AP51151 201 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 CX3CL1P78423 397 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 NDPQ00604 133 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 TBCEQ15813 527 aaPredicted RBP9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 ECSCRQ19T08 205 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 MOGAT2Q3SYC2 334 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 ZNF660Q6AZW8 331 aaPredicted RBP9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 MINDY2Q8NBR6 621 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 OR5AN1Q8NGI8 311 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 OR1N2Q8NGR9 330 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 MYOZ3Q8TDC0 251 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 CASTOR1Q8WTX7 329 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 EDARADDQ8WWZ3 215 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 PTX4Q96A99 478 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 RAB3CQ96E17 227 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 CLCC1Q96S66 551 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 GHITMQ9H3K2 345 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 ZNF221Q9UK13 617 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 BLOC1S6Q9UL45 172 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 VSIG4Q9Y279 399 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 KCNK7Q9Y2U2 307 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 WASHC3Q9Y3C0 194 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 FBXO7Q9Y3I1 522 aa9.29□□□□□ -0.92
CCHCR1-215ENST00000488920 A0A0B4J203 849 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 TRAV1-2A0A0B4J238 106 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 I3L521 148 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 PDCD5O14737 125 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 CD3GP09693 182 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 RANBP1P43487 201 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 GNB1P62873 340 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 MRPS15P82914 257 aaKnown RBP9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 CD69Q07108 199 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 FHL3Q13643 280 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 C9orf66Q5T8R8 295 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 C11orf87Q6NUJ2 197 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 ZNF383Q8NA42 475 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 ABHD5Q8WTS1 349 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 NDUFB11Q9NX14 153 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 RDH8Q9NYR8 311 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 ZMAT5Q9UDW3 170 aaKnown RBP9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 SCOCQ9UIL1 159 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 GAB2Q9UQC2 676 aa9.28□□□□□ -0.92
CCHCR1-215ENST00000488920 A0A075B6Q4 140 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 TRDV1A0A1B0GX56 115 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 A0A1W2PN81 502 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 IFITM5A6NNB3 132 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 M0R1X1 148 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 BET1O15155 118 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 FABP7O15540 132 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 SOX15O60248 233 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 RAMP3O60896 148 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 RBBP9O75884 186 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 IGKV1-16P04430 117 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 GSTT2P0CG29 244 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 GSTT2BP0CG30 244 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 GNB3P16520 340 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 MYL9P24844 172 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 CHRNA7P36544 502 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 ECI1P42126 302 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 RPS16P62249 146 aaKnown RBP9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 PSG5Q15238 335 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 ZNF260Q3ZCT1 412 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 C19orf54Q5BKX5 351 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 IGSF11Q5DX21 431 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 VAX1Q5SQQ9 334 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 ASPHD1Q5U4P2 390 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 C22orf42Q6IC83 251 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 CD200R1LQ6Q8B3 271 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 PPP1R27Q86WC6 154 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 OR4A4PQ8NGN8 299 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 OR10R2Q8NGX6 335 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 MAFIPQ8WZ33 124 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 PRR25Q96S07 402 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 RNF5Q99942 180 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 FAM103A1Q9BTL3 118 aaKnown RBP9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 ALX4Q9H161 411 aaPredicted RBP9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 METTL1Q9UBP6 276 aaKnown RBP9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 ZNF230Q9UIE0 474 aaPredicted RBP9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 RAB26Q9ULW5 256 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 FOXA2Q9Y261 457 aaPredicted RBP9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 NUBP2Q9Y5Y2 271 aa9.27□□□□□ -0.93
CCHCR1-215ENST00000488920 SMIM30A4D0T7 59 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 TFAP2AP05549 437 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 FCGR3AP08637 254 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 OR8U8P0C7N1 319 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 OR8U9P0C7N5 309 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 RAB3BP20337 219 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 SERPINB10P48595 397 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 RUNX1Q01196 453 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 ZNF616Q08AN1 781 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 NR2C2APQ86WQ0 139 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 MS4A10Q96PG2 267 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 TSNAXQ99598 290 aaKnown RBP9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 B9D2Q9BPU9 175 aa9.26□□□□□ -0.93
CCHCR1-215ENST00000488920 RAB27BO00194 218 aa9.25□□□□□ -0.93
CCHCR1-215ENST00000488920 ATP6V1G2O95670 118 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms