RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 KCNJ3P48549 501 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 SRPXP78539 464 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 SMCO1Q147U7 214 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 PHLDA2Q53GA4 152 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 LRRC10Q5BKY1 277 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 ZNF880Q6PDB4 577 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 SUMF2Q8NBJ7 301 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 LINC00052Q96N35 136 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 GLS2Q9UI32 602 aa15.96■□□□□ 0.15
CCM2-216ENST00000488727 C22orf46C9J442 243 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 FOXH1O75593 365 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 TK1P04183 234 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 HKR1P10072 659 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 ZNF44P15621 663 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 LMO1P25800 156 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 EIF5AP63241 154 aaKnown RBP15.95■□□□□ 0.14
CCM2-216ENST00000488727 CYB5R2Q6BCY4 276 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 LDLRAD3Q86YD5 345 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 MRPL30Q8TCC3 161 aaKnown RBP15.95■□□□□ 0.14
CCM2-216ENST00000488727 GLYATL2Q8WU03 294 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 ZFP57Q9NU63 452 aa15.95■□□□□ 0.14
CCM2-216ENST00000488727 POLR3KQ9Y2Y1 108 aaPredicted RBP15.95■□□□□ 0.14
CCM2-216ENST00000488727 WNK2Q9Y3S1 2297 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 K7N7A8 449 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 SLC33A1O00400 549 aaPredicted RBP15.94■□□□□ 0.14
CCM2-216ENST00000488727 TGFAP01135 160 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 PAX2Q02962 417 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 MMP26Q9NRE1 261 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 DSCAML1Q8TD84 2053 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 TRAV24A0A0B4J272 114 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 DEGS1O15121 323 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 SCTP09683 121 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 NDUFB7P17568 137 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 OR3A1P47881 315 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 HERPUD1Q15011 391 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 SP6Q3SY56 376 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 NEK7Q8TDX7 302 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 SNX22Q96L94 193 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 FAM234AQ9H0X4 552 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 TMED3Q9Y3Q3 217 aa15.94■□□□□ 0.14
CCM2-216ENST00000488727 MPPED1O15442 326 aa15.93■□□□□ 0.14
CCM2-216ENST00000488727 CD5LO43866 347 aa15.93■□□□□ 0.14
CCM2-216ENST00000488727 LY6G6DO95868 133 aa15.93■□□□□ 0.14
CCM2-216ENST00000488727 GNRHRP30968 328 aa15.93■□□□□ 0.14
CCM2-216ENST00000488727 TMEM186Q96B77 213 aa15.93■□□□□ 0.14
CCM2-216ENST00000488727 GSX1Q9H4S2 264 aaPredicted RBP15.93■□□□□ 0.14
CCM2-216ENST00000488727 PLEKHA2Q9HB19 425 aa15.93■□□□□ 0.14
CCM2-216ENST00000488727 LOC105371242A0A075B767 164 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 GPR31O00270 319 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 HSPB6O14558 160 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 LYZL2Q7Z4W2 148 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 OR4A4PQ8NGN8 299 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 SUN5Q8TC36 379 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 H1FXQ92522 213 aaKnown RBP15.92■□□□□ 0.14
CCM2-216ENST00000488727 CABLES2Q9BTV7 478 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 HIF1ANQ9NWT6 349 aa15.92■□□□□ 0.14
CCM2-216ENST00000488727 IGKV1-6A0A0C4DH72 117 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 C3orf85A0A1B0GTC6 90 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 E5RGE8 158 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 K7EPK0 472 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 GPR37O15354 613 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 GAPDHP04406 335 aaKnown RBP15.91■□□□□ 0.14
CCM2-216ENST00000488727 RPL12P30050 165 aaKnown RBP15.91■□□□□ 0.14
CCM2-216ENST00000488727 HLA-DRB3P79483 266 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 FAM71E2Q8N5Q1 922 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 ZNF565Q8N9K5 539 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 RNF141Q8WVD5 230 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 TMEM56Q96MV1 263 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 TP53RKQ96S44 253 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 DCTN5Q9BTE1 182 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 TMEM222Q9H0R3 208 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 RPUSD1Q9UJJ7 312 aaKnown RBP15.91■□□□□ 0.14
CCM2-216ENST00000488727 NSG2Q9Y328 171 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 TMEM56-RWDD3S4R434 201 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 TRAV20A0A0B4J274 112 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 IGHV2-70DA0A0C4DH43 119 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 DUXBA0A1W2PPF3 345 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 MBPP02686 304 aaPredicted RBP15.91■□□□□ 0.14
CCM2-216ENST00000488727 DVL1P1P54792 670 aaPredicted RBP15.91■□□□□ 0.14
CCM2-216ENST00000488727 UQCC3Q6UW78 93 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 MOB1BQ7L9L4 216 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 STPG2Q8N412 459 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 LHFPL5Q8TAF8 219 aa15.91■□□□□ 0.14
CCM2-216ENST00000488727 LSM5Q9Y4Y9 91 aaKnown RBP15.91■□□□□ 0.14
CCM2-216ENST00000488727 PPIAL4CA0A0B4J2A2 164 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 RAB19A4D1S5 217 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 NUDT19A8MXV4 375 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 NPIPB11E5RHQ5 1161 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 BET1O15155 118 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 CDS2O95674 445 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 EDDM3AQ14507 147 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 CLEC9AQ6UXN8 241 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 GAPTQ8N292 157 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 TPRX1Q8N7U7 411 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 OR5D13Q8NGL4 314 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 C19orf12Q9NSK7 152 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 SVEP1Q4LDE5 3571 aa15.9■□□□□ 0.14
CCM2-216ENST00000488727 TEX46H3BTG2 121 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 MGST3O14880 152 aa15.89■□□□□ 0.13
CCM2-216ENST00000488727 EDDM3BP56851 147 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms