RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 WIZO95785 1651 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 C5P01031 1676 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ARHGEF10O15013 1369 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RTL9Q8NET4 1388 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 ARAP2Q8WZ64 1704 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 NWD2Q9ULI1 1742 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 HFM1A2PYH4 1435 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 NOS1P29475 1434 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 UACAQ9BZF9 1416 aa0.81□□□□□ -2.28
SMC4-220ENST00000488017 RGPD3A6NKT7 1758 aaPredicted RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 RGPD2P0DJD1 1756 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 COL14A1Q05707 1796 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 RGPD4Q7Z3J3 1758 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 POLA1P09884 1462 aaPredicted RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 CCDC141Q6ZP82 1450 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 FYCO1Q9BQS8 1478 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 CLASP1Q7Z460 1538 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 FAM135AQ9P2D6 1515 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 PLXNA1Q9UIW2 1896 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ABCA8O94911 1581 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 UGGT1Q9NYU2 1555 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 DIP2BQ9P265 1576 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 PTPRBP23467 1997 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 SCN10AQ9Y5Y9 1956 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ZCCHC11Q5TAX3 1644 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 MADDQ8WXG6 1647 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 A0A1B0GU33 70 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 GNG14A0A1W2PPG7 69 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 A0A1W2PQL4 384 aaPredicted RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 GSTTP1A0A1W2PQM5 241 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 A6NED7 52 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 RBFOX3A6NFN3 312 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 METTL15A6NJ78 407 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 LEUTXA8MZ59 168 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 LRRN3E7EW58 273 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 H3BMM0 161 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 M0QXV9 152 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 TCAPO15273 167 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 DLEU1O43261 78 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ENSAO43768 121 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 MRPS14O60783 128 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 ZMPSTE24O75844 475 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 RPP14O95059 124 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 CDS2O95674 445 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 IGF2P01344 180 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 TCRBP04435 133 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 CALB1P05937 261 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 IGKV5-2P06315 115 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 SOD3P08294 240 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 KRT7P08729 469 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 FAM228BP0C875 321 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 STAG3L2P0CL84 134 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 SMIM6P0DI80 62 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 SLC2A1P11166 492 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 GTF2F2P13984 249 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 GABRA1P14867 456 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 CD36P16671 472 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ZNF22P17026 224 aaPredicted RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 S100A2P29034 98 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 CD40LGP29965 261 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 S100A7P31151 101 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 COILP38432 576 aaPredicted RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 CD79BP40259 229 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 MAP2K4P45985 399 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 OMPP47874 163 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 LGALS7P47929 136 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 EIF2B2P49770 351 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 RPL14P50914 215 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 XKP51811 444 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 AP3S2P59780 193 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 RAB4BP61018 213 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ARF6P62330 175 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 RANP62826 216 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 MRPS25P82663 173 aaKnown RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 BNIP2Q12982 314 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ZNHIT3Q15649 155 aaPredicted RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 GRK1Q15835 563 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 UAP1Q16222 522 aaPredicted RBP0.8□□□□□ -2.28
SMC4-220ENST00000488017 PSG3Q16557 428 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 IMPG1Q17R60 797 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ZNF181Q2M3W8 571 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 TMEM249Q2WGJ8 235 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 Q499Y3 187 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 LIN52Q52LA3 116 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 ATP6AP1LQ52LC2 224 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 TNFAIP8L3Q5GJ75 292 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 CLEC12AQ5QGZ9 265 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 NIPAL1Q6NVV3 410 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 TCF24Q7RTU0 167 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 DPPA2Q7Z7J5 298 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 GALNT10Q86SR1 603 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 DHFR2Q86XF0 187 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 BOD1L2Q8IYS8 172 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 C4orf33Q8N1A6 199 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 GAPTQ8N292 157 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 BPIFB6Q8NFQ5 453 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 OR2M3Q8NG83 312 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 OR8J3Q8NGG0 315 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 OR5H6Q8NGV6 325 aa0.8□□□□□ -2.28
SMC4-220ENST00000488017 OR6K3Q8NGY3 331 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms