RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CNEP1R1Q8N9A8 125 aa0.84□□□□□ -2.27
CCDC66-221ENST00000487739 ATP6V1C2Q8NEY4 427 aa0.84□□□□□ -2.27
CCDC66-221ENST00000487739 OR11H2Q8NH07 326 aa0.84□□□□□ -2.27
CCDC66-221ENST00000487739 OR51H1Q8NH63 302 aa0.84□□□□□ -2.27
CCDC66-221ENST00000487739 MIEN1Q9BRT3 115 aa0.84□□□□□ -2.27
CCDC66-221ENST00000487739 SPZ1Q9BXG8 430 aa0.84□□□□□ -2.27
CCDC66-221ENST00000487739 MS4A12Q9NXJ0 267 aa0.84□□□□□ -2.27
CCDC66-221ENST00000487739 SIPA1L1O43166 1804 aa0.84□□□□□ -2.28
CCDC66-221ENST00000487739 FN1P02751 2386 aaKnown RBP0.84□□□□□ -2.28
CCDC66-221ENST00000487739 THSD7AQ9UPZ6 1657 aa0.84□□□□□ -2.28
CCDC66-221ENST00000487739 MAP3K19Q56UN5 1328 aa0.84□□□□□ -2.28
CCDC66-221ENST00000487739 PCDH15Q96QU1 1955 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 TMEM235A6NFC5 223 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 K7ERQ8 282 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 SLC17A3O00476 420 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 UBE2L6O14933 153 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 NDUFS6O75380 124 aaKnown RBP0.83□□□□□ -2.28
CCDC66-221ENST00000487739 PSMG1O95456 288 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 IGHV1-69P01742 117 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 ZNF728P0DKX0 622 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 OR10J1P30954 320 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 KDELR2P33947 212 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 RAP1GDS1P52306 607 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 TAS2R45P59539 299 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 ZNF90Q03938 601 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 SMAGPQ0VAQ4 97 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 TMEM267Q0VDI3 215 aaPredicted RBP0.83□□□□□ -2.28
CCDC66-221ENST00000487739 PMS2P3Q13401 168 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 XRCC4Q13426 336 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 EXOC3L4Q17RC7 722 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 SCGB1D4Q6XE38 83 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 LRRC28Q86X40 367 aaPredicted RBP0.83□□□□□ -2.28
CCDC66-221ENST00000487739 NATD1Q8N6N6 113 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 PACRGLQ8N7B6 248 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 SPERTQ8NA61 448 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 RPS4Y2Q8TD47 263 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 SMIM12Q96EX1 92 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 MED10Q9BTT4 135 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 MRPL32Q9BYC8 188 aaKnown RBP0.83□□□□□ -2.28
CCDC66-221ENST00000487739 SLC2A9Q9NRM0 540 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 UBQLN4Q9NRR5 601 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 CHMP5Q9NZZ3 219 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 RP1L1Q8IWN7 2480 aaPredicted RBP0.83□□□□□ -2.28
CCDC66-221ENST00000487739 TMEM94Q12767 1356 aa0.83□□□□□ -2.28
CCDC66-221ENST00000487739 NPATQ14207 1427 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 DICER1Q9UPY3 1922 aaKnown RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 MED13Q9UHV7 2174 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 TRGV2A0A075B6R0 118 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 TMSB15BA0A087X1C1 80 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 DAPL1A0PJW8 107 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 METTL15A6NJ78 407 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 A8MUN3 132 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 C2orf74A8MZ97 194 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 MKRN2OSH3BPM6 223 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 YKT6O15498 198 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 GSTZ1O43708 216 aaPredicted RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 CRYBA1P05813 215 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 CA7P43166 264 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 XCL1P47992 114 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 ERHP84090 104 aaKnown RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 ANGPT1Q15389 498 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 USF2Q15853 346 aaPredicted RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 C4orf26Q17RF5 130 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 AMTNQ6UX39 209 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 DRAM2Q6UX65 266 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 Q6ZTI0 123 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 LHFPL1Q86WI0 220 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 CRLF3Q8IUI8 442 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 BAP18Q8IXM2 172 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 C1orf174Q8IYL3 243 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 RIBC1Q8N443 379 aaPredicted RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 DAND5Q8N907 189 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 RNASE6Q93091 150 aaKnown RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 PPCDCQ96CD2 204 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 ACBD6Q9BR61 282 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 EIF5A2Q9GZV4 153 aaKnown RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 OR51B6Q9H340 312 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 C1orf109Q9NX04 203 aa0.82□□□□□ -2.28
CCDC66-221ENST00000487739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 PUS1Q9Y606 427 aaKnown RBP eCLIP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 LRPPRCP42704 1394 aaKnown RBP0.82□□□□□ -2.28
CCDC66-221ENST00000487739 M0R381 172 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 COPEO14579 308 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 ATP6V1G2O95670 118 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 ATP5G1P05496 136 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 BPGMP07738 259 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 CFL1P23528 166 aaKnown RBP0.81□□□□□ -2.28
CCDC66-221ENST00000487739 EMP2P54851 167 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 CLDN12P56749 244 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 H2BFSP57053 126 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 DAD1P61803 113 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 SLC38A11Q08AI6 406 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 SLAMF1Q13291 335 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 LCN8Q6JVE9 175 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 FAM45BPQ6NSW5 357 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 SPATA12Q7Z6I5 190 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 SLC35E3Q7Z769 313 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 COA5Q86WW8 74 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 LRRC34Q8IZ02 419 aa0.81□□□□□ -2.28
CCDC66-221ENST00000487739 DEFB119Q8N690 84 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms