RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 NINJ1Q92982 152 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 SEBOXQ9HB31 216 aaPredicted RBP10.31□□□□□ -0.76
PTCD2-204ENST00000486995 PLSCR4Q9NRQ2 329 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 CACNA1DQ01668 2161 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 TRAV17A0A0B4J275 112 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 UBE2L5PA0A1B0GUS4 154 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 PRR33A8MZF0 331 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 IFNL4K9M1U5 179 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 S100A8P05109 93 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 CXCL1P09341 107 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 TUBG1P23258 451 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 RPS10P46783 165 aaKnown RBP10.31□□□□□ -0.76
PTCD2-204ENST00000486995 LINC00205P59089 165 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 ERVFRD-1P60508 538 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 CA5BP1Q8WTZ4 195 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 PINX1Q96BK5 328 aaKnown RBP10.31□□□□□ -0.76
PTCD2-204ENST00000486995 ASCL3Q9NQ33 180 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 TUBG2Q9NRH3 451 aa10.31□□□□□ -0.76
PTCD2-204ENST00000486995 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.31□□□□□ -0.76
PTCD2-204ENST00000486995 CXorf65A6NEN9 183 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 OR5H1A6NKK0 313 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 PMS2P5A8MQ11 134 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 AP4M1O00189 453 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 IGKV1D-33P01593 117 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 IGKV1-33P01594 117 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 PLA2G5P39877 138 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 ELLP55199 621 aaPredicted RBP10.3□□□□□ -0.76
PTCD2-204ENST00000486995 CATR1Q13166 79 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 CENPVQ7Z7K6 275 aaPredicted RBP10.3□□□□□ -0.76
PTCD2-204ENST00000486995 RPP25LQ8N5L8 163 aaKnown RBP10.3□□□□□ -0.76
PTCD2-204ENST00000486995 ZNF610Q8N9Z0 462 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 RFESDQ8TAC1 157 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 TCTEX1D2Q8WW35 142 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 SARAFQ96BY9 339 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 LURAP1Q96LR2 239 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 SIRT7Q9NRC8 400 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 CLN8Q9UBY8 286 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 DSPP15924 2871 aaKnown RBP10.3□□□□□ -0.76
PTCD2-204ENST00000486995 USF3Q68DE3 2245 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 IGHV3-43A0A0B4J1X8 118 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 IGHV2OR16-5A0A0B4J2B6 119 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 IGHV1-18A0A0C4DH31 117 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 LINC00473A8K010 186 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 ZNF891A8MT65 544 aaPredicted RBP10.3□□□□□ -0.76
PTCD2-204ENST00000486995 IGHV3-43DP0DP04 118 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 ZNF718Q3SXZ3 478 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 MBNL2Q5VZF2 373 aaKnown RBP10.3□□□□□ -0.76
PTCD2-204ENST00000486995 CD177Q8N6Q3 437 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 DEFB124Q8NES8 71 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 AGMATQ9BSE5 352 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 URGCP-MRPS24S4R325 110 aa10.3□□□□□ -0.76
PTCD2-204ENST00000486995 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 DIDO1Q9BTC0 2240 aaKnown RBP10.29□□□□□ -0.76
PTCD2-204ENST00000486995 A0A1B0GWJ7 208 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 MAP1LC3B2A6NCE7 125 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 DEFB108AA8MXU0 73 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 TNFSF13O75888 250 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 SMIM6P0DI80 62 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 GCH1P30793 250 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 SMIM21Q3B7S5 101 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 BEND4Q6ZU67 534 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 SLC16A13Q7RTY0 426 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 MRGPRGQ86SM5 289 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 NANPQ8TBE9 248 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 DCTN5Q9BTE1 182 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 MAP1LC3BQ9GZQ8 125 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 OPN3Q9H1Y3 402 aaPredicted RBP10.29□□□□□ -0.76
PTCD2-204ENST00000486995 ZNF71Q9NQZ8 489 aaPredicted RBP10.29□□□□□ -0.76
PTCD2-204ENST00000486995 DKK4Q9UBT3 224 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 SPAARA0A1B0GVQ0 90 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 B4DEV8 164 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 C15orf65H3BRN8 121 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 RAB29O14966 203 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 ZG16O60844 167 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 CLDN14O95500 239 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 CGAP01215 116 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 FTH1P19P0C7X4 201 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 HNF4GQ14541 408 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 STARD4Q96DR4 205 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 P2RX4Q99571 388 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
PTCD2-204ENST00000486995 TGIF2-C20orf24A0A0A6YYL0 155 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 ST8SIA5O15466 376 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 PMS2P11Q13670 270 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 ATP6V1FQ16864 119 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 ACSM6Q6P461 480 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 LURAP1LQ8IV03 231 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 TCTEX1D1Q8N7M0 179 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 DTD1Q8TEA8 209 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 LRRC29Q8WV35 223 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 MRPL37Q9BZE1 423 aaKnown RBP10.28□□□□□ -0.76
PTCD2-204ENST00000486995 PSG11Q9UQ72 335 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 CACNA1GO43497 2377 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 PRDX2P32119 198 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 PAX5Q02548 391 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 FAM180AQ6UWF9 173 aa10.28□□□□□ -0.76
PTCD2-204ENST00000486995 SLC39A9Q9NUM3 307 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms