RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 PRELID3BQ9Y3B1 194 aa10.83□□□□□ -0.68
VTI1BP1-201ENST00000486325 UNC79Q9P2D8 2635 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 A0A1W2PPE3 182 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 H0Y980 276 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 SLC31A2O15432 143 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 IGLV1-47P01700 117 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 RPA2P15927 270 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 KIR2DS2P43631 304 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 THBS3P49746 956 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 ZNF137PP52743 207 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 TMEM187Q14656 261 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 SLC9A3R2Q15599 337 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 DCAF12L2Q5VW00 463 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 LIN54Q6MZP7 749 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 VMO1Q7Z5L0 202 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 LGI3Q8N145 548 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 PNKDQ8N490 385 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 UXS1Q8NBZ7 420 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 CASTOR1Q8WTX7 329 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 TMEM222Q9H0R3 208 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 LPAR2Q9HBW0 351 aa10.82□□□□□ -0.68
VTI1BP1-201ENST00000486325 J3QLI3 93 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 M0R1X1 148 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 TNFSF12O43508 249 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 ATG12O94817 140 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 SERPINE2P07093 398 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 OR5AC1P0C628 307 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 MMP9P14780 707 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 EPHA1P21709 976 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 UCP1P25874 307 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 DUTP33316 252 aaKnown RBP10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 CEACAM3P40198 252 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 EIF4EBP1Q13541 118 aaPredicted RBP10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 HLA-DRB5Q30154 266 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 UTF1Q5T230 341 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 ZNF833PQ6ZTB9 187 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 KRTAP1-3Q8IUG1 177 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 ODF3L1Q8IXM7 274 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 LRTM2Q8N967 370 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 IL22RA2Q969J5 263 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 SIRT7Q9NRC8 400 aa10.81□□□□□ -0.68
VTI1BP1-201ENST00000486325 HECTD1Q9ULT8 2610 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 SAA2-SAA4A0A096LPE2 208 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 DUXBA0A1W2PPF3 345 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 LEUTXA8MZ59 168 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 BUB1B-PAK6H3BSN5 160 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 TXNL1O43396 289 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 PFDN1O60925 122 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 PROP1O75360 226 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 CDS2O95674 445 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 IFNA21P01568 189 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 GAPDHP04406 335 aaKnown RBP10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 SAA2P0DJI9 122 aaPredicted RBP10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 RRASP10301 218 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 ZNF16P17020 682 aaPredicted RBP10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 HLA-GP17693 338 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 COX7A1P24310 79 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 HTR1DP28221 377 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 UBE2E1P51965 193 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 LGALS4P56470 323 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 SP6Q3SY56 376 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 RPL39P5Q59GN2 51 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 ZNF695Q8IW36 515 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 OR51H1Q8NH63 302 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 TCTEX1D2Q8WW35 142 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 ASB13Q8WXK3 278 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 ST6GALNAC6Q969X2 333 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 TMEM56Q96MV1 263 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 TP53RKQ96S44 253 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 ZNF251Q9BRH9 671 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 PCGF1Q9BSM1 259 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 RAB18Q9NP72 206 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 HIF1ANQ9NWT6 349 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 DPM3Q9P2X0 92 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 AUP1Q9Y679 476 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 TMEM56-RWDD3S4R434 201 aa10.8□□□□□ -0.68
VTI1BP1-201ENST00000486325 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 DBX1A6NMT0 343 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 OOSP1A8MZH6 123 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 RBFOX2O43251 390 aaKnown RBP eCLIP10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 ARG1P05089 322 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 SULT1A3P0DMM9 295 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 SULT1A4P0DMN0 295 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 MC5RP33032 325 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 FCN2Q15485 313 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 TMEM249Q2WGJ8 235 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 ANKRD55Q3KP44 614 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 CYB5R2Q6BCY4 276 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 TGIF2LXQ8IUE1 241 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 MSI2Q96DH6 328 aaKnown RBP10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 TBX15Q96SF7 602 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 AIFM2Q9BRQ8 373 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 C7orf69Q9H7B7 122 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
VTI1BP1-201ENST00000486325 ODF3BA8MYP8 253 aa10.78□□□□□ -0.68
VTI1BP1-201ENST00000486325 RNASEK-C17orf49H0YIS7 233 aa10.78□□□□□ -0.68
VTI1BP1-201ENST00000486325 CCNKO75909 580 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms